| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_3894 |
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| Symbol | |
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| ID | 4582445 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008687 |
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| Strand | - |
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| Start bp | 1028190 |
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| End bp | 1029491 |
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| Gene Length | 1302 bp |
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| Protein Length | 433 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639771203 |
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| Product | succinyl-diaminopimelate desuccinylase |
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| Protein accession | YP_917656 |
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| Protein GI | 119386601 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | [TIGR01910] acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGCGC TTGCCCTCGA AATCGAAAAC CGCCGCGACG ATCTGATCCG CCTGACGCAG
GATCTGATCC GCATTCCGAC GCTGAACCCG CCGGGCCGCA ACTATCGCGA GATCTGCGAA
TATCTTCAGG CACGGCTGGC GCCCCGGGGC TGGACCTGCG AACTGATCCG CGCCCACGGT
GCCCCGGGCG ACAGCGAGGC CTTTCCGCGC TGGAACCTGG TCGCCCGCCA TCGGGGCGGC
CCGCGCGGCG AATGCGTGCA TTTCAACAGC CATCACGACG TGGTCGAGGT CGGCCATGGC
TGGAGCCGCG ATCCCTTTGC CGCGGAACTG GACGACGGGC GGATCTATGG CCGCGGCGCC
TGCGACATGA AGGGCGGGCT GGCCGCCAGC ATCATCGCCG CCGAAGCCTT TACCGCGCTT
TACCCCGACC ATCCGGGCCA GATCGAGATC AGCGCCACGG CGGACGAGGA ATCGGGCGGC
TTCGGCGGCG TGGCCTATCT GGCAGGCCAG GGCGCCTTTG CCCATGTCGG CCATGTCATC
ATCCCCGAGC CCCTGCACAA GGACCGCATC TGCCTGGGCC ATCGCGGTGT ATGGTGGGCC
GAGATCGAGA CGCACGGCCG CATCGCCCAT GGCTCGATGC CCTTCCTGGG CGACAGCGCC
ATCCGCCACA TGGGCGCGGT GCTGGAAGAG ATGGAGCGCA CGCTGTTCCC GCTGCTCATG
ACCAAACGGA CCCAGATGCC GGTGATCCCC GAAGGCGCGC GCAATTCGAC GCTGAACATC
AACTCGATCC ATGGCGGCGA GCCGGATCTC GGCCCGGATT TCACCGGCCT GCCAGCGCCC
TGCGTCGCCG ACCGCTGCCG CATCATCATC GACCGCCGCT TCCTGATCGA AGAGGAACTG
TCGGAAGTAA AGCGCGAGGT CGCCGCGCTC CTGGAAAAGG TCAAGGCGCA AAGGCCCGGT
TTCACCTATG AAATCCGCGA CCTGTTCGAG GTGATCCCCA GCATGACCGA CCGCGAGGCG
CCGGTGGTGC GCTCGACCGC CGCCGCCATC GAGCGGGTGC TGGGCCGCGA GGCTGGCTAT
GTGGTCAGCC CCGGCACCTA TGACCAGAAG CATATCGACC GCATCGGCAA GCTGAAGAAC
TGCATCGCCT ACGGGCCGGG CGTGCTGGAC CTGGCGCATC AGCCCGACGA ATGGGTCGGC
GTGCAGGATA TGCAGGATTC CGCTCGTGTC ATGGCCCTGG TGCTCGACGA CATCCTGCAC
GGCGCATCGG GGGATTCCCC CGGCCGGCCG CCTGTGGCAT GA
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| Protein sequence | MDALALEIEN RRDDLIRLTQ DLIRIPTLNP PGRNYREICE YLQARLAPRG WTCELIRAHG
APGDSEAFPR WNLVARHRGG PRGECVHFNS HHDVVEVGHG WSRDPFAAEL DDGRIYGRGA
CDMKGGLAAS IIAAEAFTAL YPDHPGQIEI SATADEESGG FGGVAYLAGQ GAFAHVGHVI
IPEPLHKDRI CLGHRGVWWA EIETHGRIAH GSMPFLGDSA IRHMGAVLEE MERTLFPLLM
TKRTQMPVIP EGARNSTLNI NSIHGGEPDL GPDFTGLPAP CVADRCRIII DRRFLIEEEL
SEVKREVAAL LEKVKAQRPG FTYEIRDLFE VIPSMTDREA PVVRSTAAAI ERVLGREAGY
VVSPGTYDQK HIDRIGKLKN CIAYGPGVLD LAHQPDEWVG VQDMQDSARV MALVLDDILH
GASGDSPGRP PVA
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