| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_3889 |
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| Symbol | |
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| ID | 4582440 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008687 |
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| Strand | + |
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| Start bp | 1020744 |
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| End bp | 1023800 |
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| Gene Length | 3057 bp |
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| Protein Length | 1018 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639771198 |
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| Product | acriflavin resistance protein |
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| Protein accession | YP_917651 |
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| Protein GI | 119386596 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0552128 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACTTCT CGGCCTGGTC CATACGCCAT CCGGTGCCGC CCATCGCGAT CTTCCTCGTG
CTGATGCTGA TGGGGTTCTA CAGCTTCAGC CGGCTGGCGG TCACGGCCAT GCCGAACATC
GACCTGCCGC TGGTCAGCGT GGTGGTCAGC CAGCCCGGCG CCGCGCCCAG CGAGCTGACC
CGGCAGGTGA TCCAGCCGAT CGAGGATTCC ATTGCCTCGA TCACCGGCGT CCGGCACATC
ACCTCGTCTG CGACCGACAG TTCGGCGCGG ATCTATGTCG AGTTCGAGTT GGAGACCGAT
ACCGACCGCG CCGTGAACGA CGTGAAGGAC GCGGTGGCCA ATGTCCGCGC CGACCTGCCC
GAATCCATCG TCGAACCGCT GATCCACCGC ATCGATATCA GCGGCATGGC GATCCTGACC
TATGCCGTCA GCAACCCCGG CATGAGCATC GAGGGGCTGT CGGATTTCGT CGACGACGTG
GTGTCGCGCG ACCTGTCCAC CGTGTCCGGC GTGGCCAGCA TCACCCGTAT CGGCGGTGCC
GACCGGCAGA TCAATGTCGA GCTGGACCCC GATCGCATCA TGGCCTTCGG GCTGACGGCG
GCCGAAATCT CGGACCAGCT TCGGGCCAAG AACATCGACA TGGGCGGCGG GCGCGGCGAT
CTGGCCGGCA CGGAATACTC CATCCGCGCG CTGGGATCGG CGGGCGACGT GGCCCGGCTG
GGTGCGACGC CGATCCTGAT CGGCGGCGGG CGCACGGTGC GGCTGGACCA GTTGGGCAGC
GTGACCGACG GCGCCAGCGA GGAACGCAAG TTCGCGCTGC TCGACGGCCA GCCGGTGGTG
GCCTTCGGCG TCTTCCGCGC CAGCGGCGAA TCCGACCTGG AGGCGGGCGA CGGCGCCAAG
GCCCGCATCG CCGAGATCGA GGCGCGCAAT CCCGGCACCC GGATCACCCT GATCGACGAT
GCGACGACCT ATACCTCGGG CAGCTATCAC TCGACCATGG AGACGCTCTA CGAGGGCGCG
GCGCTGGCGG TGGTGGTGGT GTTCCTGTTC CTGAGGAACT GGCGTGCGAC CCTGATCGCC
GCCGTGGCGC TGCCCCTGTC GATCATCCCG ACCTTCTTCG TCATGCACTG GCTGGGCTTT
ACGCTGAACG GCATCAGCCT TCTTGCCATC ACGCTGGTCA CCGGCATCCT GGTCGACGAC
GCCATCGTCG AGATCGAGAA TATCGTCCGG CACATCAACA TGGGCGTTCC GGCCTACGAG
GCCAGCATGG AGGCCGCGAA CGAGATCGGC CTGACCGTCA TCGCCATCAG CTTTTCCATC
GTGGCGGTGT TTGCTCCGGT CAGCTTCATG GGCGGGATTC CGGGGCAGTA TTTCAAGCAG
TTCGGGCTGA CCGTCGCGGT CTCGGTCCTG TTCTCATTGC TGGTGGCGCG GCTGATCACG
CCGATGCTGG CGGCCTATTT CCTGCGCGAC AACACCCGCC TGCCCGAAGA GCGCGACGGG
CCGGTGCTGC GCAACCTGAT GGCGGTTCTG GCCTGGACGC TGCGCCATCG CGGCCTGACG
CTGCTGATGG GGCTGGGGGT CTTTGCCGGC TCGATCTATT CCGCCACGCT GCTGCCGACC
GAGTTCATCC CGGCCTCGGA TGTCGGCCGC AGCCAGATCA GCATCGAACT GCCGCCCGGC
GCGACGGTTT CCGAAACCGA GGCGGCGGCG CGGATGATCT CGCAGCGCAT CAAGGCGGTG
CCCGAGGTGC GCTCGGTCTT CGTCAATGGC GGCGAGGACG ACGTGACCAA AGCCAAGCTG
ATGGTCAATT ACGGCCCCAA GGAAGAGCGC GAGCGATCCA GTTTCGTGAT CGAGGATGAA
TTGAAGCGCG ACCTGTCGCA GATCCCCGAC ATGAGGATCA ATTTCCAGAA CGAGGAGGGC
AATGCCGATC TGTCGATCTC GGTCCTGGGC GACAGCGAGG AGGGCGCGGC CGATGCGGCC
GAGCGGCTGA TGGCGGCGAT GAAGACGCTG CCCACGCTGG AGGGGGTGAC ATCCTCGGCC
AGCCTGCAGC GCCCCGAGAT CCAGATCCAT CCCCGGCCCG AGGTCGCGGC CCAGCTTGGC
GTGACCGCAA GCGCGCTGGC GACGACGCTG CGGGTGGCGA CGCTGGGCGA CACGGAATCG
AACCTTGCCA AGTTCAACAC CGGAGACAAG CAGATCCCGA TCATGGTGCG GCTGGACGAA
TCCGCCCGGC GCGACCTGAT GACGGTGCGC AACCTGCGGG TGCCAAGCTC GGCCGGGCAG
GTGCCGCTGG AGGTGGTGGC GGATGTGTCG ATTTCGGCCG GGGCGACCGA GATCGGCCGC
TATGACCGAC GCTATCGCAC CACGGTATCG GCGAACCTGG CGGGCGGTGC GCTGCTGGGG
CCGGTGAACG CGCAGGTGAC GGCCTTGCAG GGCCAGGTGG AACTGCCGGC GGGGACAGAG
ATCCAGGCCT CGGGCGATGC CGAGATCATG GCCGAGGTGT TCCAGGCCTT CACCGTGGCG
ATGATCTCGG GCGTGCTCCT GACCTATGTG GTGCTGGTGC TCCTGTTCCA CAATTTCGTC
ACTCCGGTTT CGATCCTGAT GTCGCTGCCG CTGGCCATCG GCGGCGCGAT CCTGGCGCTG
TTCCTGACCG GCAACTCGAT CAGCATGGCG GTGGTGATCG GCTTCCTGAT GCTGATGGGG
ATCGTGACCA AGAACGCCAT CATGCTGGTG GAATTCGCGG TCAGCTCCAT GGACCAGGGC
ACCGAAAAGC GGGCGGCGAT CCTGGATGCG GTGCACAAGC GCGCCCGGCC CATCGTGATG
ACCACCATCG CCATGACGGC GGGCATGGTG CCCTCGGCGC TCGGCACGGG CGAGGGGGCC
GAGTTCAGCT CGCCCATGGC CATCGCGGTG ATCGGCGGGC TGCTGCTGTC CACGCTGCTG
TCGCTGCTGT TCGTGCCCTC GCTGTTCTCG GTCATCCATG GCGGGCAGGT GCGGGTGGCG
CGCTGGCTGC GGCGGCGGAT CGGGCTGAAT GCGGCACCGG AGGCGGCGGG CGAGTGA
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| Protein sequence | MNFSAWSIRH PVPPIAIFLV LMLMGFYSFS RLAVTAMPNI DLPLVSVVVS QPGAAPSELT
RQVIQPIEDS IASITGVRHI TSSATDSSAR IYVEFELETD TDRAVNDVKD AVANVRADLP
ESIVEPLIHR IDISGMAILT YAVSNPGMSI EGLSDFVDDV VSRDLSTVSG VASITRIGGA
DRQINVELDP DRIMAFGLTA AEISDQLRAK NIDMGGGRGD LAGTEYSIRA LGSAGDVARL
GATPILIGGG RTVRLDQLGS VTDGASEERK FALLDGQPVV AFGVFRASGE SDLEAGDGAK
ARIAEIEARN PGTRITLIDD ATTYTSGSYH STMETLYEGA ALAVVVVFLF LRNWRATLIA
AVALPLSIIP TFFVMHWLGF TLNGISLLAI TLVTGILVDD AIVEIENIVR HINMGVPAYE
ASMEAANEIG LTVIAISFSI VAVFAPVSFM GGIPGQYFKQ FGLTVAVSVL FSLLVARLIT
PMLAAYFLRD NTRLPEERDG PVLRNLMAVL AWTLRHRGLT LLMGLGVFAG SIYSATLLPT
EFIPASDVGR SQISIELPPG ATVSETEAAA RMISQRIKAV PEVRSVFVNG GEDDVTKAKL
MVNYGPKEER ERSSFVIEDE LKRDLSQIPD MRINFQNEEG NADLSISVLG DSEEGAADAA
ERLMAAMKTL PTLEGVTSSA SLQRPEIQIH PRPEVAAQLG VTASALATTL RVATLGDTES
NLAKFNTGDK QIPIMVRLDE SARRDLMTVR NLRVPSSAGQ VPLEVVADVS ISAGATEIGR
YDRRYRTTVS ANLAGGALLG PVNAQVTALQ GQVELPAGTE IQASGDAEIM AEVFQAFTVA
MISGVLLTYV VLVLLFHNFV TPVSILMSLP LAIGGAILAL FLTGNSISMA VVIGFLMLMG
IVTKNAIMLV EFAVSSMDQG TEKRAAILDA VHKRARPIVM TTIAMTAGMV PSALGTGEGA
EFSSPMAIAV IGGLLLSTLL SLLFVPSLFS VIHGGQVRVA RWLRRRIGLN AAPEAAGE
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