Gene Pden_3887 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3887 
Symbol 
ID4582438 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp1018726 
End bp1019508 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content66% 
IMG OID639771196 
Productchromosome partitioning protein 
Protein accessionYP_917649 
Protein GI119386594 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG1192] ATPases involved in chromosome partitioning 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0820632 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.928007 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGCATA TCATCGTCGT CGGGAACGAA AAGGGCGGTT CGGGCAAGTC CACGACCTCG 
ATGCATGTGG CGACCGCGCT GGCGCGCATG GGCCATAAGG TCGGCGCGCT GGACCTGGAC
GTGCGCCAGC GCAGCTTCGG CCGTTATCTG GAGAACCGCG CCGCCTTTGC CCAACGCGAG
GGGCTGGACC TGCCGACGCC GCTGCTGGGG CATCTGGAGC CCGAAAGCCC CGGCGGCCCC
GACCCCTTGT CGCAGGCGGT GGACGCGCTG GACCGGGAAT GCGATTTCAT CCTGCTGGAC
TGCCCCGGCT CGCATACGCG GCTCAGCCAG ATGGCGCATA CGCTGGCCGA CACGCTGATC
ACGCCGATGA ACGACAGTTT CGTCGATTTC GACCTCTTGG CCCGCATGTC GCCCGAGGGC
AGGATCCTCG GCCCCTCGAT CTATGCCGAG ATGGTCTGGT CCGCCCGCCA GTTGCGCGGC
GAGGCCGGTG CCGGGCCGAT CGACTGGCTG GTGCTGCGCA ACCGGCTGGG CACGCAGGCG
ATGCACAACA AGCGCAAGGT CGGCGGCGCA TTGACCACGC TGTCCAAGCG CATCGGCTTT
CGCGTCGCGC CCGGTTTTTC CGAGCGGGTG ATCTTTCGCG AGCTGTTTCC GCGCGGATTG
ACGCTCCTGG ACCTCAAGGA TATCGGCACG GAACAGCTCA GCATGTCGAA TATCGCCGCC
CGCCAGGAAC TGCGTGAGCT GATCGGCGAG TTGAACCTAC CCGGCGTCAG CGTTTCCTTC
TGA
 
Protein sequence
MAHIIVVGNE KGGSGKSTTS MHVATALARM GHKVGALDLD VRQRSFGRYL ENRAAFAQRE 
GLDLPTPLLG HLEPESPGGP DPLSQAVDAL DRECDFILLD CPGSHTRLSQ MAHTLADTLI
TPMNDSFVDF DLLARMSPEG RILGPSIYAE MVWSARQLRG EAGAGPIDWL VLRNRLGTQA
MHNKRKVGGA LTTLSKRIGF RVAPGFSERV IFRELFPRGL TLLDLKDIGT EQLSMSNIAA
RQELRELIGE LNLPGVSVSF