Gene Pden_3884 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3884 
SymbolrplS 
ID4582435 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp1017271 
End bp1017651 
Gene Length381 bp 
Protein Length126 aa 
Translation table11 
GC content65% 
IMG OID639771193 
Product50S ribosomal protein L19 
Protein accessionYP_917646 
Protein GI119386591 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0335] Ribosomal protein L19 
TIGRFAM ID[TIGR01024] ribosomal protein L19, bacterial type 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0241892 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.932135 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCTGA TCGCCCAGTT GGAAGCCGAG CAGATCGCCG CGCTCGGCAA GGACATCCCC 
GATTTCAAGG CCGGCGACAC CGTGCGCGTC GGCTACAAGG TGACCGAAGG CACCCGTACC
CGCGTGCAGA TGTACGAAGG CGTGGTCATT TCGCGCAAGG GCGGCGGCAT CGGCGCCTCG
TTCACCGTGC GCAAGATCTC GTTCGGCGAG GGCGTCGAGC GCGTCTTCCC GCTCTATTCG
ACCAACATCG ACTCGATCAC CGTCGTGCGC CGTGGCCGCG TTCGCCGCGC CAAGCTGTAT
TACCTGCGCG ATCGCCGCGG CAAGTCGGCC CGGATCGCCG AGGTCAGCAA CTACAAGCCC
AAAGCCGACG CCAAGGCCTG A
 
Protein sequence
MNLIAQLEAE QIAALGKDIP DFKAGDTVRV GYKVTEGTRT RVQMYEGVVI SRKGGGIGAS 
FTVRKISFGE GVERVFPLYS TNIDSITVVR RGRVRRAKLY YLRDRRGKSA RIAEVSNYKP
KADAKA