| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_3882 |
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| Symbol | rimM |
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| ID | 4582433 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008687 |
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| Strand | + |
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| Start bp | 1015905 |
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| End bp | 1016408 |
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| Gene Length | 504 bp |
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| Protein Length | 167 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639771191 |
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| Product | 16S rRNA-processing protein RimM |
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| Protein accession | YP_917644 |
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| Protein GI | 119386589 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0806] RimM protein, required for 16S rRNA processing |
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| TIGRFAM ID | [TIGR02273] 16S rRNA processing protein RimM |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.13781 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.932135 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGAGC GGGTCTGTGT CGGTGCGATC GCGGGCGCCT TCGGCGTCCG GGGCGAGGTG
AGGCTGAAGA GCTTTACCTC GCAACCAAAC GATATTGCCG GATATTCCCC GCTTTACACC
GAAGACGGAA ACCGCTCGTT CACCATCCGC CTGACGCGGC CGGTGACGGG CGGGCTTGGC
GCCCGGCTAT CGGGCGTCGA GACGCGCGAA CAGGCCGAGG CGCTGAAGGG CGTGACGCTT
TGGGCCGACC GCGACAAGCT TCCGGCCCTG CCGGACGACG AATTCTATCA TGCCGACCTG
ATCGGCCTGT CGGTCTATGA CACCGGCGGG GCGCTTCTCG GCAAGGTCCG CGCGATCTAC
GACCATGGCG CCGGCGACAT CCTGGAGATA TTCGGACCCG GTCGCCGGCA GGTGCTGCTC
TTGCCCTTTA CCCGCGCCTT CGTGCCCACG GTCGATCTGG CCGCCGGCCG CATCGTCGCC
GACCCGCCGG AAGAGCAGGA ATGA
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| Protein sequence | MTERVCVGAI AGAFGVRGEV RLKSFTSQPN DIAGYSPLYT EDGNRSFTIR LTRPVTGGLG
ARLSGVETRE QAEALKGVTL WADRDKLPAL PDDEFYHADL IGLSVYDTGG ALLGKVRAIY
DHGAGDILEI FGPGRRQVLL LPFTRAFVPT VDLAAGRIVA DPPEEQE
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