| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_3881 |
|---|
| Symbol | rpsP |
|---|
| ID | 4582432 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008687 |
|---|
| Strand | + |
|---|
| Start bp | 1015531 |
|---|
| End bp | 1015905 |
|---|
| Gene Length | 375 bp |
|---|
| Protein Length | 124 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639771190 |
|---|
| Product | 30S ribosomal protein S16 |
|---|
| Protein accession | YP_917643 |
|---|
| Protein GI | 119386588 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0228] Ribosomal protein S16 |
|---|
| TIGRFAM ID | [TIGR00002] ribosomal protein S16 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.177268 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.897477 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAATGA AAATCCGCCT GGCCCGTGGT GGCTCGAAGA AACGCCCCCA TTACGCCATC
GTCGCGTCCG ATTCGCGCAT GCCGCGCGAC GGCCGCTTCA TCGAGAAGCT GGGCACCTAC
AACCCGCTGC TGCCGAAGGA TTCCGAGGAT CGCATCAAGA TGAACCTCGA GCGCGTGCAG
TACTGGCTGG GCCAGGGCGC GCAGCCGACC GACCGCGTCG CCCGCTTCCT GGAAGCCGCC
GGCGTCAAGG AGAAGGCCGA GCGCAAGAAC CTGAAGAAAG GCGAACCCGG CAAGGCCGCG
AAAGAGCGCG CCGAAAAGCG TGCCGCCCGT GAGGCCGCCG CCAACGCCCC GGCCGAAGAA
GCCGCTTCGG AATAA
|
|---|
| Protein sequence | MAMKIRLARG GSKKRPHYAI VASDSRMPRD GRFIEKLGTY NPLLPKDSED RIKMNLERVQ
YWLGQGAQPT DRVARFLEAA GVKEKAERKN LKKGEPGKAA KERAEKRAAR EAAANAPAEE
AASE
|
|---|
| |