Gene Pden_3870 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3870 
Symbol 
ID4582421 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp1003986 
End bp1004438 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content64% 
IMG OID639771179 
Productcyclase/dehydrase 
Protein accessionYP_917632 
Protein GI119386577 
COG category[I] Lipid transport and metabolism 
COG ID[COG2867] Oligoketide cyclase/lipid transport protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.301135 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCCTCAGC ACAGCGACAG CCGAATCCTG CCCTATACCG CCGACCAGAT GTATGCGCTG 
GTGGCCGATA TCGAAAGATA CCCCGAGTTC CTGCCCTGGA ACACCGCCGC CCGCATCCGC
TCGCGCCGGC CGGGCGCCTC GGGCAGCGAG GTGGTCGAGG CCGATCTGGT CATCAGCTTC
AAGGTCTTTC GCGAACGCTT TGGCTCGCGC GTGACGCTGT GGCCCGAGAC GAAGCGCATC
GATACCGAAT ATCTGGATGG TCCCTTCAAG TATCTGCGCA GCGGCTGGAG TTTCGCCGAC
CTGCCGGAGG GCGGCTGCAA GGTCGATTTC TTCGTCGATT TCGAATTCCG CAACGCCATC
CTGGGCAAGG TGATCGGCGT GGTCTTCGGC GAGGCGATGA TGCGCATCGT CCGCGCCTTC
GAGGACCGGG CGAGGGCGCT TTACGGCGCC TGA
 
Protein sequence
MPQHSDSRIL PYTADQMYAL VADIERYPEF LPWNTAARIR SRRPGASGSE VVEADLVISF 
KVFRERFGSR VTLWPETKRI DTEYLDGPFK YLRSGWSFAD LPEGGCKVDF FVDFEFRNAI
LGKVIGVVFG EAMMRIVRAF EDRARALYGA