| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_3865 |
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| Symbol | |
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| ID | 4582416 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008687 |
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| Strand | - |
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| Start bp | 998605 |
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| End bp | 1001346 |
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| Gene Length | 2742 bp |
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| Protein Length | 913 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639771174 |
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| Product | DNA gyrase subunit A |
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| Protein accession | YP_917627 |
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| Protein GI | 119386572 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit |
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| TIGRFAM ID | [TIGR01063] DNA gyrase, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.419537 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCTGACA TCCCTGAAAA CGACGACGAT ACCCCCGAGA ACGGCGGATC GGAGCGCGCC
GTGATGCATC ACGACGGCCC GGTGATCGAC ATCGCGCACG AGATGCGCTC GTCCTATCTC
GACTATGCCA TGTCGGTCAT CGTCAGCCGG GCGATTCCCG ACCTGCGCGA CGGGCTGAAG
CCGGTGCATC GCCGCGTGCT CTTCGCCATG CACGAAACCG GCAACACGCA TGACAAGCCC
TATCGCAAGT CGGCCCGCCC GGTCGGCGAC ACCATGGGTA AGTATCACCC GCATGGCGAC
GCCTCGATCT ACGACGCGCT GGTGCGGATG GCGCAGGACT TTTCCATGTC CCTGCCGCTC
CTGGACGGCC AGGGCAACTT CGGCAGCATG GACGGCGACA GCCCGGCGGC CATGCGCTAT
ACCGAGGTGC GGATGGACAA GCCCTCGGCC TATCTGCTGA TGGACATCGA CAAGGACACC
GTCGAATTCC AGGACAACTA CGACGGCAAG GACCGCGAGC CGACCGTATT GCCGGCACGC
TTCCCGAACA TGCTGGTCAA CGGCGCCGGC GGCATCGCCG TCGGCATGGC GACCAACATC
CCGCCGCACA ACCTGGGCGA GGTGGTGGAC GCCACGCTGG CGCTGATCGA GGACCCGGAC
CTGCCGACCG AACGGCTGCT GGAGATCGTG CCCGGCCCGG ATTTCCCCAC CGGCGGCATC
ATCCTGGGCC GCTCGGGGGC GCGCAAGGCC TACCTGGAAG GGCGCGGCAG CATCATCGTG
CGGGCCAAGA CCCGGATCGA GGAGACCCGC GCCGGCCGCC AGGCCATCAT CCTGGACGAG
ATCCCCTTTC AGGTGAACAA GGCCAGCCTG ATCGAGAAGA TCGCCGAGCT GGCCAAGGAA
AAGCGCATCG AGGGCATCGC CCATGTGCAG GACGAATCCG ACCGCGTCGG CGTGCGGGTG
GTGATCGAGC TGAAACGCGA CGCCACCGCC GAGGTGGTGC TGAACCAGCT GTTCCGCTTT
ACCCCCATGC AGACCAGCTT CGGCGCCAAC ATGCTGGCGC TGAACGGCGG CCGGCCCGAG
CAACTGACGC TGCGCGACTT CCTGACCCAT TTCCTGACTT TCCGCGAGGA AGTCGTCGCC
CGCCGCACCG CTTACGAATT GCGCAAGGCG CGTGAGCGCG CGCATGTGCT GTGCGGCCTC
GCCGTGGCGG TCTCGAATGT CGACGAGGTA GTGGCGACCA TCCGCTCCTC GGCAGACGCC
GCCGAGGCGC GTGAGCGGCT GATGACCCGG CGCTGGCCGG CGCATGAGAT CGTGGAATAT
CTGAAGCTGA TCGACGATCC GCTGCATCCG GTGAACGAGG ACGGCACCTA CAACCTGTCC
GAGACCCAGG CCCGCGCCAT CCTGGAACTG CGCCTGCAGC GCCTGACCCA GCTGGGCGTG
CAGGAGGTCA CCGACGAGCT GAAATCGCTG GCCGAGGCGA TCCGGGAATT CCTGGCGATC
CTTGCCTCGC GCGAGCGGAT CATGGGCATC ATCTCGGACG AACTGCGCGA GGTGAAGAAC
CTGTTCGCCG TGCCGCGCCG GACCGAAATC ACAGACTGGG CCGGCGACCT GGACGACGAG
GACCTGATCG AGCGCGAGGA CATGGTCGTC ACCATCACCT CGGGCGGCTA TATCAAGCGC
ACGGCGCTGG CCGAGTTCCG CGCCCAGCGG CGCGGCGGCA AGGGCCTGTC GGGCATGGCC
ACGAAAGAGG ACGACGTGGT CACCACCCTG TTCGTCGCCA ATACCCATAC CGAGCTCCTG
TTCTTCACCA CCGACGGCAT GGTCTACCGG CTCAAGACCT GGCGGCTGCC GCTGGGCGGG
CGCACCGCCA AGGGCAAGGC CATCGTCAAC ATCCTGCCGA TCGGGTCCGG CGTTTCCATC
GCCGCGCTGA TGCCGGTCGA TGCGCCGCAA AGCGAGTGGG ACGGCTACCA GGTGATCTTC
TCGACCTCGG AGGGCGACGT GCGCCGCAAC GCGCTGTCCG ATTTCGCCAA TGTCATGCGT
AACGGCAAGA TCGCCATGAA GCTGCCCGAA GGGGTCGAAC TGATCGGCGC GCGCATGGCG
ACCGAAAGCG ACGACGTGAT GCTGTTCACC GCCGCCGGCC GTGCGATCCG CTTCCAGACC
ACCGATGTGC GGGTGTTCAA GGGTCGCGAT TCGACCGGCG TGCGCGGCAT CCGCCTGGCA
TCCGGCGACC GCGTGGTCAG CATGTCGATC ATCCGGCATT TCGAGGCCGA TGCCGGCGAG
CGCGCCGCCT ATCTGAAGAT GCGCCGCGCC GTCGAGGGCG CACTGGACGA CGGCGCCGAG
GCAGACGAGG ACGAGGACAA CGTCGTCGAG GCCGCGATCA GCCAGGAGCG CTATGCCGAG
ATGTCGGCGG CCGAGGATCT GATCCTGACC ATCACCGCGC GCGGTGCGGG CAAGATCAGC
TCGTCGCACG ACTATCCGGT GCGCGGCCGC GGCGGCCAGG GCGTCATGGC CATGGACAAG
GCAATGCGCG GCGGGCCGCT GGTCGCCAGC TTCCCGGTGG ATCGCGACGA CCAGATCATG
CTGGCCACCT CGACCGGCCA GTCGATCCGG GTGCCTGTCG ACGGCATCAG CTTCCGCTCG
CGTTCCGCCG GCGGCGTGCG CGTCTTCAAC ACGGCGCCGG GCGAAGAGGT GGTTTCTGTT
GCCCGCATCG CCGAGAATGG CGAGGATGAG GCCGAAGCCT GA
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| Protein sequence | MADIPENDDD TPENGGSERA VMHHDGPVID IAHEMRSSYL DYAMSVIVSR AIPDLRDGLK
PVHRRVLFAM HETGNTHDKP YRKSARPVGD TMGKYHPHGD ASIYDALVRM AQDFSMSLPL
LDGQGNFGSM DGDSPAAMRY TEVRMDKPSA YLLMDIDKDT VEFQDNYDGK DREPTVLPAR
FPNMLVNGAG GIAVGMATNI PPHNLGEVVD ATLALIEDPD LPTERLLEIV PGPDFPTGGI
ILGRSGARKA YLEGRGSIIV RAKTRIEETR AGRQAIILDE IPFQVNKASL IEKIAELAKE
KRIEGIAHVQ DESDRVGVRV VIELKRDATA EVVLNQLFRF TPMQTSFGAN MLALNGGRPE
QLTLRDFLTH FLTFREEVVA RRTAYELRKA RERAHVLCGL AVAVSNVDEV VATIRSSADA
AEARERLMTR RWPAHEIVEY LKLIDDPLHP VNEDGTYNLS ETQARAILEL RLQRLTQLGV
QEVTDELKSL AEAIREFLAI LASRERIMGI ISDELREVKN LFAVPRRTEI TDWAGDLDDE
DLIEREDMVV TITSGGYIKR TALAEFRAQR RGGKGLSGMA TKEDDVVTTL FVANTHTELL
FFTTDGMVYR LKTWRLPLGG RTAKGKAIVN ILPIGSGVSI AALMPVDAPQ SEWDGYQVIF
STSEGDVRRN ALSDFANVMR NGKIAMKLPE GVELIGARMA TESDDVMLFT AAGRAIRFQT
TDVRVFKGRD STGVRGIRLA SGDRVVSMSI IRHFEADAGE RAAYLKMRRA VEGALDDGAE
ADEDEDNVVE AAISQERYAE MSAAEDLILT ITARGAGKIS SSHDYPVRGR GGQGVMAMDK
AMRGGPLVAS FPVDRDDQIM LATSTGQSIR VPVDGISFRS RSAGGVRVFN TAPGEEVVSV
ARIAENGEDE AEA
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