Gene Pden_3864 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3864 
Symbol 
ID4582415 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp997469 
End bp998539 
Gene Length1071 bp 
Protein Length356 aa 
Translation table11 
GC content67% 
IMG OID639771173 
Producthypothetical protein 
Protein accessionYP_917626 
Protein GI119386571 
COG category[R] General function prediction only 
COG ID[COG0628] Predicted permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.285096 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.3601 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGACGGGC GGGACTCGCA TCTGAGCGAG CGGTTGCAGA CCGGCTTTCT GGGCGTGATC 
GCCTTTGGCC TGATCCTGTT CCTGCTGGTG CAGGCGCGCT TCATCCTGAT CTGCCTGGTG
CTGGCCATCA TCATCTTCTC GCTGACCAGC GACGCGATTT CGGCCTTTGC CCGGCTGAAG
GTGCCGAACT GGCTGGCGAC GACGCTGGCG CTGATCGCCA TCGCAGTCGG CCTGCTTTGG
GCCGCGACGG CGTTGGTGGC GCAGGTGAAC GAGGTGGTCT CGACCTCGAT CGTCTATGCC
GACCGGGCGC AGGCGGCACT GGCGCGGCTC AGCCAACGCT GGGGGCCGAA CGTGCAGGAG
GCGATCGGCA CCTTCATGGC CAGCATAGAT TTCGCCGGCT GGATACGCTC GGCGGCGGCG
CAGGCCTCGA ACCTGATCTC GGGCTCGGTG CTGATCCTGA CCTTCGTCGG CTTCATGTTC
AGCGAACGGA TCTGGTTCCC GATCAAGATC GAGCGCCTGA CCGGCGACCC GGACCAGGCC
CGGCAGGTGC TGGAGACGGT CCACAAGATC ATGCGCCGGG TGAACCGCTA TCTGGTGGTC
AAGGCGGCGA TCAGCGCGGT CACGGCAGGG TTGATCTGGA CGATCTTCCG GGTGCAGGGG
CTGGAACTGG CCGGGGCGGT GGCCATGCTG ACCTTCATCC TGAACTTCAT CCCGACGCTG
GGCTCGATCG CGGCCACGGT CATCACCATC GCCATGGTGC TGGCGCAGAC CGGCGATCCG
ACGGTGACGC TGACCGTGGG CGGGCTGACC GTGGCGGTGC AGTTCATCAT CGGCAACGTG
TTCGACCCGA TGCTGCTGGG GCAGACGCTG CGGCTGTCCT CGTTCGGGAT CGTGCTGTCG
CTGGCGTTCT GGGGCGTGGT CTGGGGCATC GCCGGCACGT TCCTGGCCGT GCCGATCATG
GTGGCGATCA TGATCGTCTG CGCCCAGATC CCCTGGCTGC GCCCGGTCGC GATCATGCTG
TCGCAAGAGG GCCTGCCCGA GCAGGAGCCG GCCAGCGGCC TGCGCCGCTA G
 
Protein sequence
MDGRDSHLSE RLQTGFLGVI AFGLILFLLV QARFILICLV LAIIIFSLTS DAISAFARLK 
VPNWLATTLA LIAIAVGLLW AATALVAQVN EVVSTSIVYA DRAQAALARL SQRWGPNVQE
AIGTFMASID FAGWIRSAAA QASNLISGSV LILTFVGFMF SERIWFPIKI ERLTGDPDQA
RQVLETVHKI MRRVNRYLVV KAAISAVTAG LIWTIFRVQG LELAGAVAML TFILNFIPTL
GSIAATVITI AMVLAQTGDP TVTLTVGGLT VAVQFIIGNV FDPMLLGQTL RLSSFGIVLS
LAFWGVVWGI AGTFLAVPIM VAIMIVCAQI PWLRPVAIML SQEGLPEQEP ASGLRR