| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_3862 |
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| Symbol | |
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| ID | 4582413 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008687 |
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| Strand | + |
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| Start bp | 994597 |
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| End bp | 997089 |
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| Gene Length | 2493 bp |
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| Protein Length | 830 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639771171 |
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| Product | MscS mechanosensitive ion channel |
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| Protein accession | YP_917624 |
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| Protein GI | 119386569 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3264] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.725538 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.276406 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCCGCC TCGCCGCGCT GTCCCGGCTC GCATCGCTGA TCCTGGTGCT GTTTCTGGCG
CTGAACCTGC CTGCCCTTGC CCAGCAAGAG CAGGAGGCGC CGGATCTTGC CGCCTGGGAC
AAGCTGGCCG AGCAGGCCGA GCAGATCGTG GCATCGGGCT CGGCCAACGA TGTCCGCTTG
CAGGCCATCC GCGAAGAGGT GGTGAAATGG CGCGAGCGGC TGAAGGCGGG GCAGGGTATC
AACGCCACCC GCATCGCCAC GCTCAAGGAC CAGATCGCCG CGCTGGGGAC ACCCCCTGCC
GAGGGCCAGA CCGAGCCCGA GGAGATCGCC GCCCGCCGCA AGGAACTGAA CGAGCAGCTT
GCCACGTTGC AGGCACCGGG CTTGCAGGCG GTCGAAGCCT ATGGCCGCGC CGACGGCATC
GTCGCCCAGA TCGACCAGAC CCTGCGCGCC CGCCAGACCT TTGCGCTGAT CCGCAAGACG
CCCACGCCGC TGAACCCGGC GAACTGGGGA CCGGCCATGG CCGAAGCGGG CCATGTCGCC
GGACAGATCT ATGCCGAGGC GCGGGCGCGC TGGGACGGCA CCGGCGGCAT GTCCGGCTTT
ACCCAGCGCC TGCCGCTGAT CGGGGGTTTC CTGCTGGTGG CGCTGATCCT GCTGTCGCGG
GGCCGGCACT GGATCGATTC GCTGCCCTCT CGGCTGTCGG CGCGGGCCAG CGAGCGGTCG
CGCGCGGCGC TGATCTTCGG CGTCTCGCTG GGCCAGATCG CCATCCCGCT GATCGGCGTG
ATCCTGTTCG CGGCGGCGCT GGCCTCGACC GACCTGCTCG ACGACTGGGG CCTGCCGCTT
CTGCGCTCGG TGCCGGCGGC GGGGCTGTCC TTCTTTGGCG GCATCTGGCT TGGGCGGCAG
CTGTTCCCGG CCGCCGATAC CGCCGTCCAG CCGCCCCTGC CGATGGACGA GGAGCGCCGT
GCCAAGGCAC GTTTCCGCGT CACGCTGCTG GCTTCGGCGT TGGCGCTGCA CCAGCTTTTC
GCCCGCTCGA TCCTGCCGCT TTCCGGCTTC AACAGCCAGA ACGACAGCGG CACCGTGCCC
CAGCGCCTCA GCGAGGCTTC GGCCGGGGTC TGGCACTTCC TGCTGATCCT GTTCGGGGCC
TTCTGCCTGT TCAGGCTGTG CAACCTGCTG CGCGGGCTGC GCCCCGCCGA AGCGGCCGAT
ACGCCCGATT ACCGCGTCCG CGTGGTAAGC TTTCTGGCCA TGACGGGGCG GCTGGCGGCG
CTTGTCGCGC CGGTGCTGGT GGCGGTGGGC TATGTCACGG CGGGCAATGC GCTGCTCTGG
GCGCTGGTGC TGACGCTGGC GCTGGTCGGG CTGCTGGTCA TCCTGCAGGA TTTCATCGCC
GATCTTTATG CCCTGGCCAA GGGCGGCGAC CAGTCGGCGC GGGATGCGCT GATGCCGGTG
CTGATCGGAT TCGCGCTGAT CCTGCTGTCG CTGCCGCTTT TCGCGCTGAT CTGGGGCGCG
CGCGCCAGCG ACCTGGCCGA GGCCTGGACC AAGGCGCAGC AGGGCTTTTC CTTCGGCGGC
GTGCGGCTGT CGCCCATGGC GATGCTGACT TTCCTGATCG TCTTTGCCGC CGGCTATTTC
CTGACCAATT TCGTGCAGGG GGCATTCCGC AGCTCGATCC TGCCCAAGAC GAAACTGGAC
TCGGGCGGGC AGAACGCGGT CGCCTCGATG ATCGGTTATG TCGGGCTGGC GCTGGCGGCG
GTCTTTGCCG TCACCTCGGC CGGGATCGAC CTGACCTCGC TGGCCTTCGT CGCCGGTGCG
CTTTCCGTCG GCATCGGTTT CGGCATGCAG CAGGTGGTGT CGAACTTCGT CTCGGGCATC
ATCCTGCTGG TCGAGCGTCC CATCGCCGTC GGCGATTGGA TCGAGGTCGG CGGCCAGCAG
GGCGTCGTCA AGAAGATGGC GGTGCGCGCC ACGCAGATCC AGACCTTCGA CCGCACCCAG
GTGATCGTGC CGAACTCGAA CCTGATCACC CAGCCGGTCA CGAACTGGAC GCGCGGCAGC
CTGTCGGGCC GGATCATCGT GCCGGTCACC GTCTCGCATG GTTCGGACAG CCGCAAGGTC
GCCGAGCTGC TGCGCGAGAT CGCCGAGGAT CAGCCCACGG TGCTGATCAA CCCGGCGCCC
GCCGTGCTGT TGCGCAGCAT CACCGCCGAC GGGCTGAACT TCGAACTGCG CGCCGTGCTG
TCGGACATCA ACGGCGGGTC CGGGGTTTCG TCCGAGATCA ACCACCAGAT CCTCGAACGC
TTTGCGGCGG CCGGCATCGT CCTGCCGGGC AGCACCCGCC CCTCGCGCGA CATCTACCTG
CATGGCGAGG CCGACATGCC CGCGCCGGCG CCGAAACCCG TGCCCGCCGC GGCAGCTGAT
CCGCGCAAGA CCACGCCGCA GGAGGCCGAG ACGCATGACA GTGGCGAATT CGGTCCCGCC
GGCATGCAGG ACGACGATGG AGGCCGCGCA TGA
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| Protein sequence | MPRLAALSRL ASLILVLFLA LNLPALAQQE QEAPDLAAWD KLAEQAEQIV ASGSANDVRL
QAIREEVVKW RERLKAGQGI NATRIATLKD QIAALGTPPA EGQTEPEEIA ARRKELNEQL
ATLQAPGLQA VEAYGRADGI VAQIDQTLRA RQTFALIRKT PTPLNPANWG PAMAEAGHVA
GQIYAEARAR WDGTGGMSGF TQRLPLIGGF LLVALILLSR GRHWIDSLPS RLSARASERS
RAALIFGVSL GQIAIPLIGV ILFAAALAST DLLDDWGLPL LRSVPAAGLS FFGGIWLGRQ
LFPAADTAVQ PPLPMDEERR AKARFRVTLL ASALALHQLF ARSILPLSGF NSQNDSGTVP
QRLSEASAGV WHFLLILFGA FCLFRLCNLL RGLRPAEAAD TPDYRVRVVS FLAMTGRLAA
LVAPVLVAVG YVTAGNALLW ALVLTLALVG LLVILQDFIA DLYALAKGGD QSARDALMPV
LIGFALILLS LPLFALIWGA RASDLAEAWT KAQQGFSFGG VRLSPMAMLT FLIVFAAGYF
LTNFVQGAFR SSILPKTKLD SGGQNAVASM IGYVGLALAA VFAVTSAGID LTSLAFVAGA
LSVGIGFGMQ QVVSNFVSGI ILLVERPIAV GDWIEVGGQQ GVVKKMAVRA TQIQTFDRTQ
VIVPNSNLIT QPVTNWTRGS LSGRIIVPVT VSHGSDSRKV AELLREIAED QPTVLINPAP
AVLLRSITAD GLNFELRAVL SDINGGSGVS SEINHQILER FAAAGIVLPG STRPSRDIYL
HGEADMPAPA PKPVPAAAAD PRKTTPQEAE THDSGEFGPA GMQDDDGGRA
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