Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_3846 |
Symbol | |
ID | 4582397 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008687 |
Strand | + |
Start bp | 980135 |
End bp | 981040 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 639771155 |
Product | integrase catalytic subunit |
Protein accession | YP_917608 |
Protein GI | 119386553 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2801] Transposase and inactivated derivatives |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.386301 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGTGGGTT TCATCGACGC GCACCGGGAT GCGCACGGGG TCGAGCCGAT CTGCGACGTG CTGCCGATCG CCCCGTCCAC CTATTATGAT CACCTTGCGA AGCGGGCCGA TCCGTCTCGG CTGTCGGATC GGGCACGTCG GGACGAAGCG CTGCGCCCCG AGATCCTGCG CGTGTTCGAA GAGAACTGGC GGGTCTATGG TGTCCGGAAG GTCTGGCGAC AGCTTGGCCG TGAGGGCTTC GATGTCGCGC GATGCACGGT GGCACGGCTG ATGAAGAGCA TGGGTATTCA GGGCATTATC CGCGGCAAGC CGCACAGGAC GACGATCCCG GACAAGAAAG CTCCCTGTCC GCTGGACAAG GTGAACCGCC AGTTCCGCGT TCCGGCCCCG AACATGCTGT GGGTGTCGGA TTTCACCTAT GTCGCCACCT GGAAGGGTTT CGTCTATGTC GCCTTTGTCA TCGATGCCTA TGCTCGCAAG ATCGTTGGCT GGCGCGTCAG CAGTTCGGCG CATGCGGGGT TCGTTCTCGA TGCCCTAGAG CAGGCGGTGC ATGATCGCCG CCCGGGAAAG GGCATGGGGC TGGTTCACCA CAGCGACAGG GGCTCGCAAT ACCTGTCTAT TCGCTACACT GAGCGCTTGG CGGAGGCCGG TATCGAACCC TCGGTGGGCA GCGTCGGCGA CAGTTACGAC AACGCCTTGG CCGAGACGAT CAATGGCCTG TTCAAGGCGG AGGTCATCCA CCGCCGTGGC CCATGGCGCA GCTTGGAAGC CGTGGAATAC GCGACGCTCG AATGGGTGGA CTGGTTCAAC AACCGCCGTC TTCTCGAGCC CATAGGGAAC ATCCCGCCCG CAGAAGCCGA GGCCAACTTC TATGCAGCTC TGGAAACTGA AGCCATGGCT GCGTAA
|
Protein sequence | MVGFIDAHRD AHGVEPICDV LPIAPSTYYD HLAKRADPSR LSDRARRDEA LRPEILRVFE ENWRVYGVRK VWRQLGREGF DVARCTVARL MKSMGIQGII RGKPHRTTIP DKKAPCPLDK VNRQFRVPAP NMLWVSDFTY VATWKGFVYV AFVIDAYARK IVGWRVSSSA HAGFVLDALE QAVHDRRPGK GMGLVHHSDR GSQYLSIRYT ERLAEAGIEP SVGSVGDSYD NALAETINGL FKAEVIHRRG PWRSLEAVEY ATLEWVDWFN NRRLLEPIGN IPPAEAEANF YAALETEAMA A
|
| |