Gene Pden_3846 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3846 
Symbol 
ID4582397 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp980135 
End bp981040 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content62% 
IMG OID639771155 
Productintegrase catalytic subunit 
Protein accessionYP_917608 
Protein GI119386553 
COG category[L] Replication, recombination and repair 
COG ID[COG2801] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.386301 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGGGTT TCATCGACGC GCACCGGGAT GCGCACGGGG TCGAGCCGAT CTGCGACGTG 
CTGCCGATCG CCCCGTCCAC CTATTATGAT CACCTTGCGA AGCGGGCCGA TCCGTCTCGG
CTGTCGGATC GGGCACGTCG GGACGAAGCG CTGCGCCCCG AGATCCTGCG CGTGTTCGAA
GAGAACTGGC GGGTCTATGG TGTCCGGAAG GTCTGGCGAC AGCTTGGCCG TGAGGGCTTC
GATGTCGCGC GATGCACGGT GGCACGGCTG ATGAAGAGCA TGGGTATTCA GGGCATTATC
CGCGGCAAGC CGCACAGGAC GACGATCCCG GACAAGAAAG CTCCCTGTCC GCTGGACAAG
GTGAACCGCC AGTTCCGCGT TCCGGCCCCG AACATGCTGT GGGTGTCGGA TTTCACCTAT
GTCGCCACCT GGAAGGGTTT CGTCTATGTC GCCTTTGTCA TCGATGCCTA TGCTCGCAAG
ATCGTTGGCT GGCGCGTCAG CAGTTCGGCG CATGCGGGGT TCGTTCTCGA TGCCCTAGAG
CAGGCGGTGC ATGATCGCCG CCCGGGAAAG GGCATGGGGC TGGTTCACCA CAGCGACAGG
GGCTCGCAAT ACCTGTCTAT TCGCTACACT GAGCGCTTGG CGGAGGCCGG TATCGAACCC
TCGGTGGGCA GCGTCGGCGA CAGTTACGAC AACGCCTTGG CCGAGACGAT CAATGGCCTG
TTCAAGGCGG AGGTCATCCA CCGCCGTGGC CCATGGCGCA GCTTGGAAGC CGTGGAATAC
GCGACGCTCG AATGGGTGGA CTGGTTCAAC AACCGCCGTC TTCTCGAGCC CATAGGGAAC
ATCCCGCCCG CAGAAGCCGA GGCCAACTTC TATGCAGCTC TGGAAACTGA AGCCATGGCT
GCGTAA
 
Protein sequence
MVGFIDAHRD AHGVEPICDV LPIAPSTYYD HLAKRADPSR LSDRARRDEA LRPEILRVFE 
ENWRVYGVRK VWRQLGREGF DVARCTVARL MKSMGIQGII RGKPHRTTIP DKKAPCPLDK
VNRQFRVPAP NMLWVSDFTY VATWKGFVYV AFVIDAYARK IVGWRVSSSA HAGFVLDALE
QAVHDRRPGK GMGLVHHSDR GSQYLSIRYT ERLAEAGIEP SVGSVGDSYD NALAETINGL
FKAEVIHRRG PWRSLEAVEY ATLEWVDWFN NRRLLEPIGN IPPAEAEANF YAALETEAMA
A