| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_3844 |
|---|
| Symbol | |
|---|
| ID | 4582395 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008687 |
|---|
| Strand | - |
|---|
| Start bp | 978675 |
|---|
| End bp | 979703 |
|---|
| Gene Length | 1029 bp |
|---|
| Protein Length | 342 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 639771153 |
|---|
| Product | transposase IS116/IS110/IS902 family protein |
|---|
| Protein accession | YP_917606 |
|---|
| Protein GI | 119386551 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3547] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.464911 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.417432 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACAACG CCACCATCAT CGGCATCGAT CTGGCGAAGC GCGTCTTCCA CGCGCACGGA
GCACACATCG ACGGCAGCGT CGCGTTCAGG AAGCGGTTGA CCCGAGCTCA AATGCTTCCG
TTCCTGTCGG CGCAGCCGCG TTGCGTGGTC GTTATGGAGG CATGCGCCAG CGCTCATGAA
TGGGGCCGCG CGATCCAGCA GCTCGGCCAC GATGTGCGGC TCATCCCACC CAGCTACGTC
AAGCCATATG TGAAGCGGCA GAAGAACGAT ACGGCGGACG CGGAGGCCAT TGCCGAAGCA
GGGTCTCGGC CGACAATGCG CTTCGTCGCC GTGAAGACCG AGGAACAGCA GGCGCGCTCC
ATGGTCTTCC GGACGCGCGA TCTGCTCGTG CGCCAAAGGA CGCAACTGAT CAATGCCCTG
CGCGGCCACC TCGCAGAACA CGGTCTCGTT GTGCCGCAAG GACCGGCTCA CCTGAAGTCT
CTGGCCAAAG CACTGGACGC GACCGATGTC GCAATTCCGC AGCTGGTTCG CGATATCGGC
CGGATCTACC TCGAGCAGAT CGAACAGCTG AACGCCAAAA TTGCAGACCT CGAGAAAACG
CTTCGTCGCG AAGCCCAATT CGGCGAAGAA ATACGCCGCT TGCAGACGAT GCCGGGCATC
GGCCCGATCA CAGCCATGGC GGTGGAGGTA TTCGCACCAC CTATGCAGAC CTTCAAGCGT
GGTCGCGACT TTGCCGCCTG GCTTGGACTC GTGCCGGTTC AGCACTCAAC CGGCGGCAAG
CAGCGGCTCG GGCGCACCTC GAAGATGGGT CAACGCGACA TCCGAAGGCT CCTAATAATC
GGAGCCATGG CGGTGATACG ATGGGCGTCC CGCCGCGGCG CACGGCCTGG CTCGTGGCTC
AGCCGCATGA TGGACCGCAA GCCGCTGATG TTGGTCGCCG TAGCCTTGGC AAACAAGATG
GCGCGCGCGA TCTGGGCCAT GCAGACCAAG AGAGAAGACT ATCGGGATCC CGGTCTCGCA
GCCGCTTGA
|
|---|
| Protein sequence | MNNATIIGID LAKRVFHAHG AHIDGSVAFR KRLTRAQMLP FLSAQPRCVV VMEACASAHE
WGRAIQQLGH DVRLIPPSYV KPYVKRQKND TADAEAIAEA GSRPTMRFVA VKTEEQQARS
MVFRTRDLLV RQRTQLINAL RGHLAEHGLV VPQGPAHLKS LAKALDATDV AIPQLVRDIG
RIYLEQIEQL NAKIADLEKT LRREAQFGEE IRRLQTMPGI GPITAMAVEV FAPPMQTFKR
GRDFAAWLGL VPVQHSTGGK QRLGRTSKMG QRDIRRLLII GAMAVIRWAS RRGARPGSWL
SRMMDRKPLM LVAVALANKM ARAIWAMQTK REDYRDPGLA AA
|
|---|
| |