Gene Pden_3823 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3823 
Symbol 
ID4582374 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp961636 
End bp962655 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content65% 
IMG OID639771132 
Productribose-phosphate pyrophosphokinase 
Protein accessionYP_917585 
Protein GI119386530 
COG category[E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism 
COG ID[COG0462] Phosphoribosylpyrophosphate synthetase 
TIGRFAM ID[TIGR01251] ribose-phosphate pyrophosphokinase 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGGCCA TGACCGAACC GAAGCTTATC GCGGGGAATG CGAACCGGCC TCTGGCCAAT 
GCCATCGCCC GGCGCATGTC GATGCATCGC GGGATGAACG TCGCCCCCAT CGAGGCGCGG
GTCGAGCGCT TCAACGATCA GGAAATCTTC GTCGAAGTCT ATGAGAACGT CCGCGGCGAG
GACATGTTCA TCATCCAGCC GACCTCGAAC CCGGCCAATG ACAACCTGAT GGAACTGCTG
ATCATGACGG ATGCGCTGAA GCGCTCGTCG GCGGCGCGCA TCACGGCGGT GATCCCCTAT
TTCGGCTATG CCCGGCAGGA CCGCCGCGCC AAGGCCCGCA CGCCGATCAG CGCCAAGCTG
GTGGCGAACC TGTTGACCGA GGCGGGCGTG GACCGCGTGC TGACGCTGGA CCTGCATGCC
GCGCAGATCC AGGGCTTTTT CGACATTCCG GTGGACAACC TCTATGCCGC GCCGGTCTTT
GCGCTGGACA TCAAGCATCA TTTCCGCGAG CGGCTCTCGG ACCTGATGGT GATCTCGCCC
GACGTGGGCG GCGTGGCGCG GGCGCGCGAA CTGGCGCAGC GCATCGGCGC ACCGCTGGCC
ATCGTGGACA AGCGCCGCGA GAAGCCGGGC GAGGTGGCCG AGATGACCGT GATCGGCGAC
GTGACCGGCA AGACCTGCAT CATCGTCGAC GACATCTGCG ACACGGCCGG CACGCTGTGC
AAGGCGGCGC AGGTCCTGAC CGAGCACGGC GCGACCGAGG TTCACGCCTA TATCACCCAT
GGCGTCCTGT CCGGCCCGGC GGTCGAGCGG GTGCAGGGCT CGGTGATGAA ATCGCTGGTC
ATCACCGATT CCATCGAGCC GACCGAAAAG GTGAAATCGG CCTCGAACAT CCGCATCGTG
CCGACCGCGC CGATGTTTGC GCAGGCGATC CTGAACATCT GGAACGGCAC TTCGGTCAGC
TCGCTGTTCG AGGTGGACAC GCTGGGTCCG ATCTACGAAG GGCTCTATTC GGGCGTCTGA
 
Protein sequence
MPAMTEPKLI AGNANRPLAN AIARRMSMHR GMNVAPIEAR VERFNDQEIF VEVYENVRGE 
DMFIIQPTSN PANDNLMELL IMTDALKRSS AARITAVIPY FGYARQDRRA KARTPISAKL
VANLLTEAGV DRVLTLDLHA AQIQGFFDIP VDNLYAAPVF ALDIKHHFRE RLSDLMVISP
DVGGVARARE LAQRIGAPLA IVDKRREKPG EVAEMTVIGD VTGKTCIIVD DICDTAGTLC
KAAQVLTEHG ATEVHAYITH GVLSGPAVER VQGSVMKSLV ITDSIEPTEK VKSASNIRIV
PTAPMFAQAI LNIWNGTSVS SLFEVDTLGP IYEGLYSGV