Gene Pden_3821 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3821 
Symbol 
ID4582372 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp960188 
End bp960958 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content71% 
IMG OID639771130 
Productalpha/beta hydrolase fold 
Protein accessionYP_917583 
Protein GI119386528 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGCGC TGCATCTGAG ACGCTGGCCG GGCAACGAGG ACCGCCCGGC GCTGGCGCTG 
CATTGCATGA TGGGCAACGG CGTCTATTGG GGGCCGATCG CCGAGACGCT GCGCGAGCGG
GCGCGGATCA GCGCCCCCGA CCTGCCCGGT CATGGGCAAA GCCCGGACTG GGAAGGCACA
ATGCCGGACT ACCATACCTT TGTCACGCGC GAGGCCGCCG CGCTGATCGA CCGGCCGCTG
GACCTGATCG GCCACAGCAT GGGCGCGACC GTGGCGCTGC GCATCGCCGT CGCCGCCCCC
GAGGCCGTGC GCAGCCTGAC CCTGATCGAG CCGGTGCTGT TCGCAGCGGC GCCCGAAGCC
TTCAACGACG CGCTGCTGGA CGATGTCGCG GCCCGTCTCG CCGCCGGAGA GGATGCCGAG
GCGGCCCGCG CCTTCCTTGG CGTCTGGGGC GGGCTCGACT GGGATTCGCA AACGCCGTCC
GGCAAGGCGC GGCTGGCGCG GCAGATCCAT CTGGTCCAGG CCAGCAACGA TGCGCTGCGC
CGGGATACCG CCAATATCCT GCGGCCGGAC GGGCTTGAAG CCATCGACGC GCCGGTGCTG
ATCGTCATGG GCGAGGATTC GCCCCCCGTC ATTCCGGCGA TTGCCGATGC GCTGGCGGCA
CGGCTGCCCG ATGTCGGACG CGCCCGCGTT CCCGGTGCGG GCCACATGCT GCCGATCACC
CACCCCCGGC AGGTGGCCGA ATTGATCGGG CTGAACCTGG ACCGCGCCTG A
 
Protein sequence
MSALHLRRWP GNEDRPALAL HCMMGNGVYW GPIAETLRER ARISAPDLPG HGQSPDWEGT 
MPDYHTFVTR EAAALIDRPL DLIGHSMGAT VALRIAVAAP EAVRSLTLIE PVLFAAAPEA
FNDALLDDVA ARLAAGEDAE AARAFLGVWG GLDWDSQTPS GKARLARQIH LVQASNDALR
RDTANILRPD GLEAIDAPVL IVMGEDSPPV IPAIADALAA RLPDVGRARV PGAGHMLPIT
HPRQVAELIG LNLDRA