| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_3819 |
|---|
| Symbol | |
|---|
| ID | 4582370 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008687 |
|---|
| Strand | + |
|---|
| Start bp | 959291 |
|---|
| End bp | 959737 |
|---|
| Gene Length | 447 bp |
|---|
| Protein Length | 148 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639771128 |
|---|
| Product | ATP synthase F1, epsilon subunit |
|---|
| Protein accession | YP_917581 |
|---|
| Protein GI | 119386526 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0355] F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit) |
|---|
| TIGRFAM ID | [TIGR01216] ATP synthase, F1 epsilon subunit (delta in mitochondria) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.590081 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGACA CGATGCAGTT CGACCTCGTC TCGCCGGAAC GGAACCTGGT TTCCGTCCCG
GTGCGCGAGG TGCGCCTGCC CGGCGCCGAT GGCGACCTGA CGGCGATGCC CGGCCATGCG
CCGGCCATCG TCAACCTGCG CCCCGGTCTG GTGACCGTGG TGGCTGGGGA CGGGTCCGAG
ACGGAATTCG CGGTGACCGG CGGTTTCGCC GAGATCAACA ACGAATCCGT CACCCTGCTG
GCCGAACGCG GACATCCCCG CGCCGAGATG ACGCAAGAGG TCTTCAACGA GATGATGGCC
CAGGCCCGTC GTCGCGTCGA AGCCGCCAAG GAGCGCGAAT CCGCCGGAGA GGAGCTGGTC
GCCGCCGCGG TCAAGCTGCT GGCCGACATG GAGGCGCTTG GCACGCATAT CGGGCTCGAT
CCGAACCATG CGAATTTCCC GCATTAG
|
|---|
| Protein sequence | MADTMQFDLV SPERNLVSVP VREVRLPGAD GDLTAMPGHA PAIVNLRPGL VTVVAGDGSE
TEFAVTGGFA EINNESVTLL AERGHPRAEM TQEVFNEMMA QARRRVEAAK ERESAGEELV
AAAVKLLADM EALGTHIGLD PNHANFPH
|
|---|
| |