Gene Pden_3813 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3813 
Symbol 
ID4582364 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp952964 
End bp953710 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content69% 
IMG OID639771122 
Producthydroxyacylglutathione hydrolase 
Protein accessionYP_917575 
Protein GI119386520 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID[TIGR03413] hydroxyacylglutathione hydrolase 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCTGG AACTCGTTCC CGTCCGCTGC CTGACCGACA ACTATGCCTG GCTCCTGCAC 
GGGAACGGAC GGACCGCGCT GGTCGATGCG CCGGAAGCGG CACCCATCCT GGCAGAATTG
GCCGCGCGCG GATGGTCGCT GGACCAGATC GCGCTGACCC ATCACCACGC CGACCATATC
CAGGCCGTGC CCGAGTTGGT GGACAGGACC GGGGCCTGGG TCGTAGGCAA TGCCGGCGAC
GCCACCCGGC TGCCGCCCCT GGACCAGCCC GTCCGCCCTG GCGAACGCTT CACCCTTTGC
GGAGAGGACG CCGAGGTCAT CGACGTGCCG GGCCACACCA TCGGCCATGT CGCCTTTCAC
CTGCCCGCCT CGGCCATGGT GTTCACCGCC GACAGCCTGA TGGCGCTTGG CTGCGGCCGG
CTGTTCGAGG GCGATGCCGA CATGATGTGG GCCAGCCTCT CGCGCCTGAA CGCCCTGCCT
GCGGAAACGC TGGTTTGCTC GGGACATGAT TATTGCCGCG GCAACGGCGC CTTCGCCCTG
TCGGTGGAGC CCGGCAACGC CGCATTGCAG AAACGACTGG CCGAGACGGC GGCGGGCCAA
CGCCCCTGCG CCCCCTCCAC CCTGGCCGAG GAGCGGGTCA CGAATCCCTT CCTGCGGGTC
AGGGAGCTGG CGGATTCCCT GGGCCTGCAG GGGGCTTCCG ATGCCGCGGT CTTTGCCGAG
CTTCGCGCCA GGAAGGATCG CTTCTGA
 
Protein sequence
MPLELVPVRC LTDNYAWLLH GNGRTALVDA PEAAPILAEL AARGWSLDQI ALTHHHADHI 
QAVPELVDRT GAWVVGNAGD ATRLPPLDQP VRPGERFTLC GEDAEVIDVP GHTIGHVAFH
LPASAMVFTA DSLMALGCGR LFEGDADMMW ASLSRLNALP AETLVCSGHD YCRGNGAFAL
SVEPGNAALQ KRLAETAAGQ RPCAPSTLAE ERVTNPFLRV RELADSLGLQ GASDAAVFAE
LRARKDRF