| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_3812 |
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| Symbol | |
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| ID | 4582363 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008687 |
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| Strand | - |
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| Start bp | 950384 |
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| End bp | 952702 |
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| Gene Length | 2319 bp |
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| Protein Length | 772 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639771121 |
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| Product | ATP-dependent Clp protease, ATP-binding subunit clpA |
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| Protein accession | YP_917574 |
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| Protein GI | 119386519 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
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| TIGRFAM ID | [TIGR02639] ATP-dependent Clp protease ATP-binding subunit clpA |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.356989 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.716878 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCGTCCT TTTCGACCTC GTTGGAACAG GCCATCCATG CCGCGCTCGC GCTGGCCAAC
GAACATCGCC ATGAGCTTGC CACGCTCGAG CACCTGTTGC TCGCGCTGAC GGAAGAGCCC
GATGCCGTGA AGGTGATGCG GGCTTGCAAT GTCGATCTGG ACGAGTTGCG CCGGATGCTG
GTCGAGTTCA TCGAGGACGA CCTTTCGACC CTCATCACCG ATGTCGAGGG TTCCGAGGCC
GTCCCCACCG CCGCATTCCA GCGCGTGATC CAGCGCGCTG CGATCCATGT CCAAAGCTCG
GGCCGGACCG AGGTGACGGG GGCGAACGTC CTGGTCGCCA TCTTCGCCGA GCGGGAATCG
AACGCCGCCT TCTTCCTGCA GGAACTGGAC ATGACGCGCT ACGACGCGGT GAATTTCATC
GCCCATGGCG TCGCCAAGAA CCCGTCCTTC TCGGAAAACC GCCCGGTCCA GGGCGCCGAG
CAGCAGGACC AGGCCCAGGC GGAAACCGCC CAGGCCAAGG ACGAATCCGC GCTGGCGAAA
TATTGCGTCG ACCTCAACAA GAAGGCCGCC AAGGGCGATG TCGATCCCCT GATCGGCCGC
GCCGACGAGG TGGAGCGCTG CATCCAGGTG CTCTGCCGCC GGCGCAAGAA CAACCCGCTG
CTGGTCGGCG ATCCCGGCGT CGGAAAGACC GCCATCGCCG AAGGGCTGGC ATTGAAGATC
ACCCGGGGCG AGACGCCGGA CGTGCTGGCG GGCTCGACCA TCTTCTCGCT CGACATGGGC
GCGCTGCTGG CCGGCACCCG CTATCGCGGC GACTTCGAGG AGCGGCTGAA AGCCGTCGTC
AAGGAGTTGG AGGACCATCC CGACGCCATC CTCTTCATCG ACGAGATCCA TACGGTGATC
GGCGCCGGCG CCACGTCCGG GGGCGCGATG GATGCCTCGA ACCTGCTGAA GCCCGCATTG
GCCGGCGGCA AGCTGCGCTG CATGGGCTCG ACCACCTACA AGGAATTCCG CCAGCATTTC
GAAAAGGACC GCGCGCTGTC GCGCCGCTTC CAGAAGATCG ACGTGAACGA GCCGACCGTG
CCCGACACGA TCAAGATCCT GATGGGGCTG AAGCCCAGTT TCGAAAAGCA TCACGACCTG
CGCTACACCA ATGACGCGAT CAAGATGGCG GTCGAGTTGT CGGCACGCTA CATCCACGAC
CGCAAGCTGC CCGACAAGGC CATCGACGTG ATCGACGAGG CCGGCGCCGC GCAGCACCTG
GTCGCGGAAA GCAAGCGCCG CAAGACCATC GGCCCCAAGG AGATCGAGGC AGTGGTGGCC
AAGATCGCCC GCATCCCCCC GAAAAGCGTC TCCAAGGACG ATGCGGCGGT GCTCAAGGAC
CTGGACGCAA CGCTCAAGCG CCTGGTCTTC GGCCAGGATG CGGCGATCGA GGCACTGTCC
TCGGCCATCA AGCTGGCACG GGCCGGGCTG CGCGAGCCCG AAAAGCCGAT CGGCAACTAT
CTCTTCGCGG GCCCGACCGG CGTCGGCAAG ACCGAGGTCG CCAAGCAGCT CGCTTCGACG
CTCGGCGTGG AACTGCTGCG CTTCGACATG TCGGAATATA TGGAGAAGCA TGCGGTCAGC
CGGCTGATCG GCGCGCCTCC GGGCTATGTC GGCTTCGACC AGGGCGGGCT TCTGACCGAT
GGCGTGGACC AGCATCCGCA TTGCGTGCTG CTGCTCGACG AGATCGAAAA GGCGCATCCG
GATGTCTACA ACATCCTGCT GCAGGTCATG GATCACGGCA AGCTGACGGA CCATAACGGT
CGCCAGGTGG ATTTCCGCAA TGTGATCCTG ATCATGACCT CGAACGCCGG TGCGGCGGAC
CAGGCCAAGG CCGCCTTCGG CTTCGGCCGC GAGCGGCGCG AGGGCGAGGA TACCGCCGCC
ATCGAGCGCA CCTTCACGCC CGAATTCCGC AATCGCCTGG ATGCGGTCAT CAGCTTCGCG
CCGCTCTCGC GCGAGATCAT CGTGCAGGTG GTCGAGAAAT TCGTCCTCCA GCTCGAGGCC
CAGCTGATCG ACCGTGGCGT CCATATCGAA CTGACCGCCG AGGCCGCCGA CTGGCTGGCC
GAACGCGGCT ATGACGAAAA GATGGGCGCC CGCCCGCTGG GCCGCGTGAT CCAGGAAACG
ATCAAGAAGC CCCTGGCCGA AGAGCTGCTG TTCGGCCGAC TGACCAAGGG CGGGGTGGTC
CGGGTGCGGA TCGAGGACGA CAAGCCGGTC TTCGACATCA CCGGCCCCGA AACGCCCAGG
ATCAGCAACT CCAAGCCGCC GCTGCTGACC GCGGATTGA
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| Protein sequence | MPSFSTSLEQ AIHAALALAN EHRHELATLE HLLLALTEEP DAVKVMRACN VDLDELRRML
VEFIEDDLST LITDVEGSEA VPTAAFQRVI QRAAIHVQSS GRTEVTGANV LVAIFAERES
NAAFFLQELD MTRYDAVNFI AHGVAKNPSF SENRPVQGAE QQDQAQAETA QAKDESALAK
YCVDLNKKAA KGDVDPLIGR ADEVERCIQV LCRRRKNNPL LVGDPGVGKT AIAEGLALKI
TRGETPDVLA GSTIFSLDMG ALLAGTRYRG DFEERLKAVV KELEDHPDAI LFIDEIHTVI
GAGATSGGAM DASNLLKPAL AGGKLRCMGS TTYKEFRQHF EKDRALSRRF QKIDVNEPTV
PDTIKILMGL KPSFEKHHDL RYTNDAIKMA VELSARYIHD RKLPDKAIDV IDEAGAAQHL
VAESKRRKTI GPKEIEAVVA KIARIPPKSV SKDDAAVLKD LDATLKRLVF GQDAAIEALS
SAIKLARAGL REPEKPIGNY LFAGPTGVGK TEVAKQLAST LGVELLRFDM SEYMEKHAVS
RLIGAPPGYV GFDQGGLLTD GVDQHPHCVL LLDEIEKAHP DVYNILLQVM DHGKLTDHNG
RQVDFRNVIL IMTSNAGAAD QAKAAFGFGR ERREGEDTAA IERTFTPEFR NRLDAVISFA
PLSREIIVQV VEKFVLQLEA QLIDRGVHIE LTAEAADWLA ERGYDEKMGA RPLGRVIQET
IKKPLAEELL FGRLTKGGVV RVRIEDDKPV FDITGPETPR ISNSKPPLLT AD
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