Gene Pden_3808 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3808 
Symbol 
ID4582359 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp944224 
End bp944796 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content69% 
IMG OID639771117 
Producthypothetical protein 
Protein accessionYP_917570 
Protein GI119386515 
COG category[S] Function unknown 
COG ID[COG2930] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.582275 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGTATT CCAAGCGGAT GAGCCGGCGC CTGGTGCTGC TGGGCGGTGC GGCGCTGGGG 
CTGGCGGGCT GCTCGAACGC GGTCGGGCAG GATGCGCCCT CGCGGCTGGA CGCGCGGGTC
GATGCGACGC GGGATTTCCT GCGGCGCAGC TATCCCAACG TGGCGCCCAT GGTGCAGAAC
GCCAAGGGCG TGCTCTACAT GCCGCTGATG ACCGAGGCGG GATTCGGCGT CGGCGGCGCC
TATGGCCAGG GCGCGCTGCG CATCAACGAC GTGACGGTGG ACTACTATTC GGCGACGCAG
GCCAGCGTCG GCTTCCAGAT CGGCGCACAG CAATATGCGC ATGTGCTGAT CTTCCAGACC
GATGCCGCGC TGGCCGATTT CCGCAGGGCG CCGGGCTGGG TGGCCGAGGC CGGGGCCTAT
TACGCCCTGC CCGCCGGCGG CGTCTCGATG GGCACCGACA CCATCACCTC GCAGCAGCCG
GTGGTGGCGA TGGTGTTCGG CCAGTCCGGG CTGATGGCCG GTGCCTCGAT CGCCGGGACG
AAATACACCC GCATCATCCC CTCGACCTTC TGA
 
Protein sequence
MMYSKRMSRR LVLLGGAALG LAGCSNAVGQ DAPSRLDARV DATRDFLRRS YPNVAPMVQN 
AKGVLYMPLM TEAGFGVGGA YGQGALRIND VTVDYYSATQ ASVGFQIGAQ QYAHVLIFQT
DAALADFRRA PGWVAEAGAY YALPAGGVSM GTDTITSQQP VVAMVFGQSG LMAGASIAGT
KYTRIIPSTF