Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_3808 |
Symbol | |
ID | 4582359 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008687 |
Strand | - |
Start bp | 944224 |
End bp | 944796 |
Gene Length | 573 bp |
Protein Length | 190 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639771117 |
Product | hypothetical protein |
Protein accession | YP_917570 |
Protein GI | 119386515 |
COG category | [S] Function unknown |
COG ID | [COG2930] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.582275 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGTATT CCAAGCGGAT GAGCCGGCGC CTGGTGCTGC TGGGCGGTGC GGCGCTGGGG CTGGCGGGCT GCTCGAACGC GGTCGGGCAG GATGCGCCCT CGCGGCTGGA CGCGCGGGTC GATGCGACGC GGGATTTCCT GCGGCGCAGC TATCCCAACG TGGCGCCCAT GGTGCAGAAC GCCAAGGGCG TGCTCTACAT GCCGCTGATG ACCGAGGCGG GATTCGGCGT CGGCGGCGCC TATGGCCAGG GCGCGCTGCG CATCAACGAC GTGACGGTGG ACTACTATTC GGCGACGCAG GCCAGCGTCG GCTTCCAGAT CGGCGCACAG CAATATGCGC ATGTGCTGAT CTTCCAGACC GATGCCGCGC TGGCCGATTT CCGCAGGGCG CCGGGCTGGG TGGCCGAGGC CGGGGCCTAT TACGCCCTGC CCGCCGGCGG CGTCTCGATG GGCACCGACA CCATCACCTC GCAGCAGCCG GTGGTGGCGA TGGTGTTCGG CCAGTCCGGG CTGATGGCCG GTGCCTCGAT CGCCGGGACG AAATACACCC GCATCATCCC CTCGACCTTC TGA
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Protein sequence | MMYSKRMSRR LVLLGGAALG LAGCSNAVGQ DAPSRLDARV DATRDFLRRS YPNVAPMVQN AKGVLYMPLM TEAGFGVGGA YGQGALRIND VTVDYYSATQ ASVGFQIGAQ QYAHVLIFQT DAALADFRRA PGWVAEAGAY YALPAGGVSM GTDTITSQQP VVAMVFGQSG LMAGASIAGT KYTRIIPSTF
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