| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_3807 |
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| Symbol | |
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| ID | 4582358 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008687 |
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| Strand | + |
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| Start bp | 943514 |
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| End bp | 944161 |
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| Gene Length | 648 bp |
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| Protein Length | 215 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639771116 |
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| Product | lytic transglycosylase, catalytic |
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| Protein accession | YP_917569 |
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| Protein GI | 119386514 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.561941 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTTCAC GCGATCAGGC GATGCTGCGC CGGTTGGGCC GGGCCGTAAT GGCCCTGACG
CTTTCGGCTG GGCTGGCTGC GCCCGCTGCG GCCGAAGGGC TGCGGCTGCA GGTGAAAAGC
GGCAAGTCGC GACAGGCGCA GTTCGAGCGC CAGACCCGGC TGATGGATTC GCGCCTGGCC
GGGCAATACC AGCAATCGGC CCGGCTGCGC CCGGGCGGCA CTTCGACCAA GAGCGTGGTC
GAGCTGGACC TGCCCACAGC CGTGCCCGCC TATAACGGCA ACCGGCGCAG CCAGTATCTG
CCCCATGCCC GCGCCATGGC CCGCAAGCAT GGCGTCCCCG AGGATCTGTT CCTGCGCCTC
GTGCAGCAGG AATCGGGCTG GAACCCGTCG GCACGCTCGC ACAAGGGCGC GCGCGGGCTG
GCGCAGCTGA TGCCTGGCAC CGCTGCCAAG CTGGGCGTCG ATCCGAACGA CCCGATCCAG
AACCTGGAAG GCGGCGCGCG TTATCTGCGC ATGATGTACA ACACCTTCGG CAACTGGCGG
CTGGCGCTGG CGGCCTATAA TGCCGGTCCG GGGGCGGTGG CGAAATACGG CGGCGTGCCG
CCCTATCGCG AGACGCGCAA CTACGTCCGC ATCATCCACG GCAGCTGA
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| Protein sequence | MLSRDQAMLR RLGRAVMALT LSAGLAAPAA AEGLRLQVKS GKSRQAQFER QTRLMDSRLA
GQYQQSARLR PGGTSTKSVV ELDLPTAVPA YNGNRRSQYL PHARAMARKH GVPEDLFLRL
VQQESGWNPS ARSHKGARGL AQLMPGTAAK LGVDPNDPIQ NLEGGARYLR MMYNTFGNWR
LALAAYNAGP GAVAKYGGVP PYRETRNYVR IIHGS
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