Gene Pden_3805 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3805 
Symbol 
ID4582356 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp942233 
End bp942772 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content69% 
IMG OID639771114 
Productcarboxymuconolactone decarboxylase 
Protein accessionYP_917567 
Protein GI119386512 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.565066 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTTCTT CCTGCCCGCC GCTTGCGGAT GCCGACTGGC CCGCAGAGAT CCTCGACCTG 
CGCCAGGGTT TTGCCGGGGC GCTGAACGTC TATCGCACCA TGGCCCATCA CCCCGCGCTG
TTGCGGGCCT GGGCGCCGCT GCGCCAGCAT GTCGTCAAGG ATACCGCGCT TGGCCCGATC
CGCTCGGAAC TGGTGATCCT GCGGGCGGCC CATCGCATGG GCTCGGCTTA TGAATGGGCG
CATCACGTCA GCCGCGCGCG GGCGCTTGGC ATGGCGGACG AGCGCATCCT TGCCATGCGC
GGCGAGGGCA TGCCGGGGGG CGAGGACGGG CTGATCGCGG CGGCGGTCGA TGCGCTTTTC
GACCAGCGCC GCCTGCCCGA GACGCTGGAG GCCGAACTGG CGCAGGCCCT TGGGCGCGAG
GCGGTCATGG ACCTGATCGC CACCGTCGGC TTCTATTCGG TCCTAGGCTA TATCCTGATG
ACCTACGGCA CGCCGATCGA CGATGCCGTG GCGGCCGAAA TGGCCGCCCG GCCGCTTTAG
 
Protein sequence
MTSSCPPLAD ADWPAEILDL RQGFAGALNV YRTMAHHPAL LRAWAPLRQH VVKDTALGPI 
RSELVILRAA HRMGSAYEWA HHVSRARALG MADERILAMR GEGMPGGEDG LIAAAVDALF
DQRRLPETLE AELAQALGRE AVMDLIATVG FYSVLGYILM TYGTPIDDAV AAEMAARPL