| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_3798 |
|---|
| Symbol | |
|---|
| ID | 4582349 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008687 |
|---|
| Strand | + |
|---|
| Start bp | 933412 |
|---|
| End bp | 934737 |
|---|
| Gene Length | 1326 bp |
|---|
| Protein Length | 441 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639771107 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_917560 |
|---|
| Protein GI | 119386505 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0161] Adenosylmethionine-8-amino-7-oxononanoate aminotransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.0570227 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCAGGA TTCTTCACCG CTCGATTGCA GCGGCATTGC CGCGCGCGGT CTCGGGGCAG
GGCGTCCATA TCGGCGATGC CGAGGGGCGC AGCTATATCG ACGGCTCGGG GGGTGCGGCG
GTCAGTTGCC TGGGCCACGG CAATGCCGAG GTGCTGGAGG CGATGCGCGC CCAGATGGAT
CGCATCGCCT ATGCCCATAC CTCGTTCTTC ACCACCGATG CCGCGGAATC GCTGGCCGAG
CGGCTGGTGC GGCTGGCCCC CGAGGGGCTG GACTATGTCT ATCCGGTCTC GGGCGGTTCC
GAGGCGGTCG AGGCGGCGCT GAAGATGGCG CGGCAGTATT TCGTCGAGAT CGGCCAGCCG
CAGCGGCGCC ATATCATCGC CCGGCGGCAG AGCTATCACG GCAACACCAT CGGCGCGCTG
GCCGCGGGCG GCAATGCCTG GCGCCGCGCG CAGTTCCAGC CGATCCTGCC CGAGACGCAT
CACGTCTCGC CCTGCTATGC CTATCGCGAC CAGCGCCCGG ACGAGACGGT CGAGGATTAC
GCCGCGCGGC TGGCCGCGGA GCTGGAGGCC AGGATCATCG AGCTCGGCCC GGATCAGGTG
ATCGCTTTCG TGGCCGAGCC GGTGGTCGGC GCCACCATGG GCGCGGTGCC GGCGGTGCCG
GGCTATTTCC GCCGCATCCG CGAGGTTTGC GACCGCCATG GCGTGCTGCT GATCCTGGAC
GAGGTGATGT GCGGCATGGG GCGCACCGGC TCGATCTTCG CCTGCGCGGC CGAGGGCGTG
CGTCCCGACC TGGTCACCAT CGCCAAGGGC TTGGGGGGCG GATACCAGCC CATCGGCGCG
GTGATGCTGT CCGAGCGCAT CTATCGCGCC TTTGCCGACG GGTCCGGCCT GTTCCAGCAC
GGCCATACCT ATATCGGCCA TCCGGTCGCT GCCGCTGCCG CCGACAAGGT GGTCGAGATC
CTGTCGCGCC CCGGGATGAT GGAGCATGTG CAGGCCATGG GAGAGCGCCT GCAATCCGGC
CTCGACGCTG CGCTGGGGCA ATCGCCCCAT GTCGGCGACA TTCGGGGCAG GGGGTTGTTC
CGGGGCATCG AGCTTGTCGC CGACAAGGAC GACAAGGCGC CCTTCGATCC CGCCCGCCGC
ATCCATGCGC GCGTCAAGAA AGAGGCGATG GCGCGCGGCC TGCTGTGCTA TCCGATGGGC
GGGACCATCG ACGGGGTGCG CGGCGACCAT GTCCTGCTGG CGCCGCCCTA TATCATCCAG
CCCGAGGAAA TCGACCAGAT CGTCGACCGT CTTGCCGGCG CCATCGCCGC CGCGACGGCG
GGGTAG
|
|---|
| Protein sequence | MTRILHRSIA AALPRAVSGQ GVHIGDAEGR SYIDGSGGAA VSCLGHGNAE VLEAMRAQMD
RIAYAHTSFF TTDAAESLAE RLVRLAPEGL DYVYPVSGGS EAVEAALKMA RQYFVEIGQP
QRRHIIARRQ SYHGNTIGAL AAGGNAWRRA QFQPILPETH HVSPCYAYRD QRPDETVEDY
AARLAAELEA RIIELGPDQV IAFVAEPVVG ATMGAVPAVP GYFRRIREVC DRHGVLLILD
EVMCGMGRTG SIFACAAEGV RPDLVTIAKG LGGGYQPIGA VMLSERIYRA FADGSGLFQH
GHTYIGHPVA AAAADKVVEI LSRPGMMEHV QAMGERLQSG LDAALGQSPH VGDIRGRGLF
RGIELVADKD DKAPFDPARR IHARVKKEAM ARGLLCYPMG GTIDGVRGDH VLLAPPYIIQ
PEEIDQIVDR LAGAIAAATA G
|
|---|
| |