| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_3795 |
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| Symbol | |
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| ID | 4582346 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008687 |
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| Strand | - |
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| Start bp | 929216 |
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| End bp | 930628 |
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| Gene Length | 1413 bp |
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| Protein Length | 470 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639771104 |
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| Product | polysaccharide deacetylase |
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| Protein accession | YP_917557 |
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| Protein GI | 119386502 |
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| COG category | [G] Carbohydrate transport and metabolism
[S] Function unknown |
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| COG ID | [COG0726] Predicted xylanase/chitin deacetylase
[COG3195] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03164] OHCU decarboxylase
[TIGR03212] putative urate catabolism protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0520356 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGATACA GCCGCGACAT GATCGGTTAT GGCGAGCACA CGCCCGACCC CCAATGGCCC
GGCAACGCCC GGATCGCGGT GCAGATCGTC ATCAACTACG AAGAAGGCGG CGAAAACAGC
ATCGAGCACG GCGACGCTGC CTCGGAAGCC TTCCTGTCCG AGATCATCGG CTGCCAGCCC
TGGCCCGGCA AGCGCCACTG GAACATGGAA TCGATCTATG ACTACGGCGC GCGGGCGGGT
TTCTGGCGCC TCCATCGCCT GCTCAAGGAT GTGCCGCTGA CCATCTACGG CGTCGCCACC
GCGCTTGAGC GTGCGCCCGA GCAGGTCGCC GCCATGCAGG CCGCAGGGTG GGAGATCGCC
ACCCACGGCT ATAAATGGAT CGACTACCGG GACATCCCGC GCGAGGTCGA GGCCGAGCAT
ATAGCCAAGG CCATCGAGCT GCACACCCGC GTCACCGGCG AACGGCCGCG CGGCTTCTAC
CAGGGCCGCA CCTCGATGAA CACGGTCGAG CTGGGCTGCG AGGAAGGCGG CTTCGAATAC
CTGGCCGACA CCATCGCCGA CGACCTGCCC TATTGGCACG TCCACGACGG CAAGCCGCAG
CTGATGGTAC CCTATACGAT GGACGCCAAC GACATGCGCT TTTCGTCCGG CCAGGGTTTC
GGCACCGGGG TCGAGTTCTT CGACTACCTG CGCGACAGCT TCGACGTGCT CTATGCCGAG
GGCGAGGCCG GCGCGCCCAA GATGATGTCC ATCGGGCTGC ATTGCCGCCT TGCCGGCCGT
CCGGGCCGCG CCATCGCGGT GCAGAAATTC ATCGAACACG CCCGCAAGCA CGAGGGCGTC
TGGTTCGCCA CCCGGCTCGA CATCGCGCGG CACTGGGCCA GGACCCATCC CTACCAGCCG
AAGCAGCGCC CCTCGCAGAT GGAACGCGAG GAGTTCGTCG CGGCCTTCGG CGGCATCTAC
GAGCATTCGC CCTGGATCGC GGAGCGAGTC TGGGAAGGCG AGATGGGCGC GATCCACGAC
ACCCCCGGCG GGCTTGCCGC ACGCATGGCG CAGGTCTTCC GCGCCGCCAG CGACGAGGAA
CGGCTGGGCG TGCTGCTGGC GCACCCGGAC CTGGCGGGCA AGCTGGCCGC TGCCAAGCGC
CTGACCGCCG ACAGCACCGC CGAACAGGCA AGCGCGGGCC TCGACAGCCT GACCGACGAC
GAGCGCGCCG AATTCGACCG GCTGAACACG GCTTATGTGG AAAAGCACGG CTTCCCCTTC
ATCATCGCCG TGCGCGACCA CGACAAGCCG GGGATCATGG CCGCCATGCG CCGGCGCATC
GACAACGACA CCGCGACCGA GCGCGCCGAG GCCGAGCGCC AGGTCAGCCG CATCGGCGCG
CTGCGCCTGC AACAGATCCT GGGCGATAAC TGA
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| Protein sequence | MRYSRDMIGY GEHTPDPQWP GNARIAVQIV INYEEGGENS IEHGDAASEA FLSEIIGCQP
WPGKRHWNME SIYDYGARAG FWRLHRLLKD VPLTIYGVAT ALERAPEQVA AMQAAGWEIA
THGYKWIDYR DIPREVEAEH IAKAIELHTR VTGERPRGFY QGRTSMNTVE LGCEEGGFEY
LADTIADDLP YWHVHDGKPQ LMVPYTMDAN DMRFSSGQGF GTGVEFFDYL RDSFDVLYAE
GEAGAPKMMS IGLHCRLAGR PGRAIAVQKF IEHARKHEGV WFATRLDIAR HWARTHPYQP
KQRPSQMERE EFVAAFGGIY EHSPWIAERV WEGEMGAIHD TPGGLAARMA QVFRAASDEE
RLGVLLAHPD LAGKLAAAKR LTADSTAEQA SAGLDSLTDD ERAEFDRLNT AYVEKHGFPF
IIAVRDHDKP GIMAAMRRRI DNDTATERAE AERQVSRIGA LRLQQILGDN
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