| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_3794 |
|---|
| Symbol | |
|---|
| ID | 4582345 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008687 |
|---|
| Strand | - |
|---|
| Start bp | 928302 |
|---|
| End bp | 929129 |
|---|
| Gene Length | 828 bp |
|---|
| Protein Length | 275 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 639771103 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_917556 |
|---|
| Protein GI | 119386501 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3257] Uncharacterized protein, possibly involved in glyoxylate utilization |
|---|
| TIGRFAM ID | [TIGR03214] putative allantoin catabolism protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.332323 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.0189653 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGCCA CCACCCCGAC CTATGCCGGG CCTTTCGCCG GCCTGCCGCC GCAGACCGAC
CTGACGACCG ACACCGCCAC CTTCACCGAA GCCTATGCCG TCATCCCCGC CAGCACGATG
CGCGACATCG TCACCAGCTT CCTGCCGGGC TGGACGGGGA TGCGGATGTG GATGATCGCC
CGCCCGCTCT CGGGCTTCGC CGAGACTTTC AGCCAATATA TCGTCGAGCT TGCGCCGCAG
GGCGGCTCGG ACCGGCCCGA GGACGACGCG GGCGTGCAGG CGGCGATCTT CGTCACCGAA
GGCACGATCA CGGTGACCAT CGACGGCACG GCGCATGAGC TGACCCCCGG CGGCTTTGCC
TATATCCCGG CGGGCATGGC ATGGTCAGTG AAGAATGGCG CCGAAACCGC GCGCTTTCAT
TGGTGGCGCA AGCGCTGGCA GGCAGTCGAG GGGTTGTCGA AGCCCGACGT GATCGTCGCC
AACGAACGCG ACATCGCCCC GATCCCGATG CCCGACACCA ACGACAGCTG GGCGACCACC
CGCTTCATGG ACCCGGACGA CCTGCGCCAC GACATGCATA TCACCATTGT GACCTTCAAG
CCCGGCGGCT CGATCCCCTT TGCCGAGACG CATGTGATGG AGCACGGGTT GTTCGTGATC
GAGGGCAAGG CGGTCTATCG GCTGAACCGC GACTGGGTCG AGGTCGGCCC GGGGGATTTC
ATGTGGCTGC GCGCCTTTTG CCCGCAATGC TGCTATGCCG GCGGTCCGGG CAATTTCCGC
TATCTGCTCT ACAAGGACGT GAACCGCCAC GCGCCGATCT GGAAGTAA
|
|---|
| Protein sequence | MTATTPTYAG PFAGLPPQTD LTTDTATFTE AYAVIPASTM RDIVTSFLPG WTGMRMWMIA
RPLSGFAETF SQYIVELAPQ GGSDRPEDDA GVQAAIFVTE GTITVTIDGT AHELTPGGFA
YIPAGMAWSV KNGAETARFH WWRKRWQAVE GLSKPDVIVA NERDIAPIPM PDTNDSWATT
RFMDPDDLRH DMHITIVTFK PGGSIPFAET HVMEHGLFVI EGKAVYRLNR DWVEVGPGDF
MWLRAFCPQC CYAGGPGNFR YLLYKDVNRH APIWK
|
|---|
| |