| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_3793 |
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| Symbol | |
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| ID | 4582344 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008687 |
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| Strand | + |
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| Start bp | 927552 |
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| End bp | 928208 |
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| Gene Length | 657 bp |
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| Protein Length | 218 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639771102 |
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| Product | 2OG-Fe(II) oxygenase |
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| Protein accession | YP_917555 |
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| Protein GI | 119386500 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3145] Alkylated DNA repair protein |
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| TIGRFAM ID | [TIGR00568] DNA alkylation damage repair protein AlkB |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.529649 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.0181991 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACAATTC CGTGGGAGAA CGGCATGGAG CCAGACCTGT TCGGAACCCG TCGCGACGAG
CCCATCGGCC CGGGCGCCAT GATCCTGCGC GGCCTTGCCT CGGCCCCCGA GATCCTGGCC
GAGGTCGAGC GCATCGCCGC CCTTTCGCCC TTCCGCCACA TGCTGACCCC GGGCGGGCGC
CGGATCGGTG TCGAGATGAC GAATTGCGGT GCGCTCGGCT GGGTCAGCGA CCGGCGCGGC
TATCGCTATG AGCCCTGCGA TCCGCTGACC GGGCGACCCT GGCCGGCGAT GCCCGCACGC
TTCCTGCAAC TGGCGGATGA GGCGGCCGCG CGGGCGGGGT TCCCCGGCTT CCGGCCCGAT
GCCTGCCTGG TCAACCGCTA TGTGCCGGGG GTCAAGATGG GATTGCACCA GGATCGCGAC
GAGGCGGGAT TCGATGCGCC CATCGTCTCG GTCTCGCTGG GCTTGCCGGC GACGTTCCAG
TTCGGCGGTC CCGAGCGCAG CGATCCGGTG GCGAAGCATG TGCTGGACCA TGGCGATGTC
GTGGTCTGGG GCGGGCCGGC GCGGCTGGCC TGGCACGGCA TCCTGACGCT GAGACGGGCC
GAGCATCCGC TGACCGGCGC CGCGCGCATC AACCTGACCT TTCGCCGCGC CGGCTAG
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| Protein sequence | MTIPWENGME PDLFGTRRDE PIGPGAMILR GLASAPEILA EVERIAALSP FRHMLTPGGR
RIGVEMTNCG ALGWVSDRRG YRYEPCDPLT GRPWPAMPAR FLQLADEAAA RAGFPGFRPD
ACLVNRYVPG VKMGLHQDRD EAGFDAPIVS VSLGLPATFQ FGGPERSDPV AKHVLDHGDV
VVWGGPARLA WHGILTLRRA EHPLTGAARI NLTFRRAG
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