Gene Pden_3789 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3789 
Symbol 
ID4582340 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp924454 
End bp925101 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content71% 
IMG OID639771098 
Productphosphoribosylanthranilate isomerase 
Protein accessionYP_917551 
Protein GI119386496 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0135] Phosphoribosylanthranilate isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.167739 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0064312 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCCGTTT CCGTCAAGAT CTGCGGCCTG ACCGAGGCCG CGGGCCTCGC GGCGGCCGTC 
GACGCGGGCG CACGCTATGT CGGCTTCGTC TTCTTTCCGA AATCCCCCCG CCATGTGACG
CCCGGGACGG CGGCGGAGCT GGCCGCGCAA GTGCCGCTGG GCGTGGCCAA GGTCGGGCTG
TTCGTGAACC CCGATGACGC GGCGCTGGAC GCGGTGCTGG CACATGTGCC CCTGGACGTG
ATCCAGTTGC ACGGCGCCGA GACGCCCGCC CGCGTGGCCG AGGTCAAGGC GCGTACCGGC
CTGCCGGTGA TGAAGGCGGT GGGCGTGGCC GATCCGCAGG ATCTCGACGC GCTCTGGGAT
TACGGGCTGG TCGCCGACAT GCTGCTGATC GACGCGAAAC CGCCCAAGGA TGCGGTGCTG
CCGGGCGGCA ACGGGCTTGC CTTCGACTGG CGGCTGCTGG CCGGGCGGCA GATCCTCAAG
CCCTGGCTGC TTGCCGGCGG CCTGACGCCC GAGAACGTGC ATGAGGCGAT CCGCCTGACC
CGCGCGCCGG GCGTCGATGT CTCCTCCGGC GTCGAAAGCG CGCCCGGCGT CAAGGATCCC
GACCGCATCC GCAGCTTCAT CGCCCGCGCC ACGGCGCCGA TCCTGTGA
 
Protein sequence
MAVSVKICGL TEAAGLAAAV DAGARYVGFV FFPKSPRHVT PGTAAELAAQ VPLGVAKVGL 
FVNPDDAALD AVLAHVPLDV IQLHGAETPA RVAEVKARTG LPVMKAVGVA DPQDLDALWD
YGLVADMLLI DAKPPKDAVL PGGNGLAFDW RLLAGRQILK PWLLAGGLTP ENVHEAIRLT
RAPGVDVSSG VESAPGVKDP DRIRSFIARA TAPIL