Gene Pden_3788 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3788 
Symbol 
ID4582339 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp924048 
End bp924449 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content69% 
IMG OID639771097 
Producthypothetical protein 
Protein accessionYP_917550 
Protein GI119386495 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.149286 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00561497 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCGCGCGA TCCGGGTCTT CTTCTTTGTC ATTCTGGCCG TCGTGCTGAT GCTGTTGGCG 
GCGGCGAATC GCCAGCTTGT CACTGTCAGC CTGGTACCAG AGGCGCTGGC GCCCTTTGCC
GGCGGGCAAT GGTCGTTGAC CATGCCCGCC TTTGTCGCGC TGTTCCTGGC CATGGTCTTC
GGCGTGCTGC TCGGGCTGGT CTGGGAATGG ATCCGCGAAT CGCATCTGCG CGCCGAATCC
AGCCGCCGGG CGCATGATCT GGCGCAGCTG CAGCGCGAGG TCGGCGATCT GCGCCGCACC
CATGCCGCGC CGCGCGACGA TGTGCTGGCG ATCCTGGACG AGACGCGCAA GCCGGCGGCC
GCCCCGGCGG GCACGGGTTC GACCCTGCCG GCGCCGCGTT GA
 
Protein sequence
MRAIRVFFFV ILAVVLMLLA AANRQLVTVS LVPEALAPFA GGQWSLTMPA FVALFLAMVF 
GVLLGLVWEW IRESHLRAES SRRAHDLAQL QREVGDLRRT HAAPRDDVLA ILDETRKPAA
APAGTGSTLP APR