Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_3787 |
Symbol | ihfB |
ID | 4582338 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008687 |
Strand | + |
Start bp | 923722 |
End bp | 924009 |
Gene Length | 288 bp |
Protein Length | 95 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 639771096 |
Product | integration host factor subunit beta |
Protein accession | YP_917549 |
Protein GI | 119386494 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0776] Bacterial nucleoid DNA-binding protein |
TIGRFAM ID | [TIGR00988] integration host factor, beta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.0868324 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.00129518 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGATCCGAT CCGAACTGAT CCAGAAGATC TCCGAAGAAA ACCCGCATCT GTTCCAGCGC GATGTCGAGC GGATCGTGAA CACCGTCTTC GAGGAGATCA TCGACGCCAT GGCCCGGGGC GACCGGGTGG AGTTGCGCGG CTTCGGTGCC TTCTCGGTCA AGAAGCGCGA CGCCCGCCAG GGCCGCAACC CGCGCACCGG CGAGACCGTC AGCGTCGACG AAAAGCATGT GCCCTTCTTC AAGACCGGCA AGCTGTTGCG GGAACGGTTG AACGGCCTCG ACGAATAG
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Protein sequence | MIRSELIQKI SEENPHLFQR DVERIVNTVF EEIIDAMARG DRVELRGFGA FSVKKRDARQ GRNPRTGETV SVDEKHVPFF KTGKLLRERL NGLDE
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