| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_3785 |
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| Symbol | |
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| ID | 4582336 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008687 |
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| Strand | + |
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| Start bp | 920603 |
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| End bp | 921682 |
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| Gene Length | 1080 bp |
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| Protein Length | 359 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 639771094 |
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| Product | 2-nitropropane dioxygenase, NPD |
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| Protein accession | YP_917547 |
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| Protein GI | 119386492 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2070] Dioxygenases related to 2-nitropropane dioxygenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.109724 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.000233096 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCCCGC GCTTCCAGCT TTCCGACCTG CGCGTGCCGG TGATCCAGGC GCCGATGGCC
GGCACTGCGA CGCCGCATCT TGCCGCCGAG GTCGGCCGGG CAGGGGGGCT GGGTTCGCTG
GGACTGGGTG CCTCGAACGC CGCGCAGGCC GCCGCCATGA TGGCCGAGAC GCGCGAGCGG
CTGGGCTCGG GCCGCTATGG CGTCAACCTG TTCTGCCATC GTCCCGCGCA GGCCGATGCC
GCGCGCGAGG CGGGCTGGCT CGATTATCTT GCGCCCGAGT TCCACCGCTT CGATGCCGAG
CCTCCGGCCC GGATCGAGGA GATCTATCGC AGCTTCGTCG AGGATGACGA CATGCTGCGC
GCGGTGCTGG CGGCGCAGCC GGCGCTGGTC AGTTTTCATT TCGGCCTGCC TTCGGCCGAG
CGTATCGCCG CCCTGCGCGA CGGCGGCGCC GTGCTGGCGG CGACCGCGAC CTCGCGGGCC
GAGGCGCTGG CGATCCGCGA GGCGGGGCTC GACCTGATCG TCGCGCAGGG CTACGAGGCA
GGCGGGCATC GCGGCATCTT CGATCCCGAC GGTGCCGACG AGCGCCTGTC GACCCAGGCA
TTGCTGCCCG AATTGCTGGA CCTTGGCCTG CCGGTGATCG CGGCCGGCGG CATCATGGAG
GGCGCGGATG CGGCGCGGCA CCTCGCCGCG GGGGCGGCGG CGGTGCAGAT GGGCACGGCT
TTCGTCGCCT GCCCTGAATC GGCCGCGAAT GACGCGTATC GCAACCGACT GGCCGGGGCG
AAGTCGGGCG ACACGGTGAT GACCCGCGTC ATTTCGGGCC GTCCGGCGCG CGGGCTGGCC
AACCGGCTGA CCGCTCTTGG CGAGGCGGCC GAGGCGCCGG CCCTGCCGGA CTATCCGATC
ACCTACGACG CGGCGAAGCG GCTTCATGCG GTGGCCGGCG GTTCGGATTA CGCGGCGCAA
TGGGCGGGGG CCGAGGTGTC GCGCGCCCGT CCGATGCCGG CGGCAGACCT CGTGGCGCTG
CTGGAGCGCG AGATTCAGGC GCATTTCCCC GGTCTCGGCG CTTGCCAGAA GGGCCGATGA
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| Protein sequence | MSPRFQLSDL RVPVIQAPMA GTATPHLAAE VGRAGGLGSL GLGASNAAQA AAMMAETRER
LGSGRYGVNL FCHRPAQADA AREAGWLDYL APEFHRFDAE PPARIEEIYR SFVEDDDMLR
AVLAAQPALV SFHFGLPSAE RIAALRDGGA VLAATATSRA EALAIREAGL DLIVAQGYEA
GGHRGIFDPD GADERLSTQA LLPELLDLGL PVIAAGGIME GADAARHLAA GAAAVQMGTA
FVACPESAAN DAYRNRLAGA KSGDTVMTRV ISGRPARGLA NRLTALGEAA EAPALPDYPI
TYDAAKRLHA VAGGSDYAAQ WAGAEVSRAR PMPAADLVAL LEREIQAHFP GLGACQKGR
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