Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_3726 |
Symbol | rpsB |
ID | 4582278 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008687 |
Strand | - |
Start bp | 874433 |
End bp | 875218 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639771036 |
Product | 30S ribosomal protein S2 |
Protein accession | YP_917489 |
Protein GI | 119386434 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0052] Ribosomal protein S2 |
TIGRFAM ID | [TIGR01011] ribosomal protein S2, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.361852 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACATGG CGCTTCCCGA ATTCTCCATG CGTCAGCTGC TTGAAGCTGG CGTTCATTAC GGCCACCAGA CCCAGCGCTG GAACCCTCGC ATGGCCGAGT TCATCTATGG TGAACGCAAC GGCATCCACA TCGTCGACCT GACCCAGACC GTGCCGATGC TGGACGCGGC GCTGCAAGTC GTGCGCGACA CCGTCGCCAA GGGCGGCCGG GTGCTGTTCG TCGGCACCAA GCGTCAGGCG CAGAAGGCCG TCGCCGATGC GGCCGAGCGT TCGGCGCAGT TCTACATGAA CCACCGCTGG CTCGGCGGCA CGCTGACCAA CTGGAAAACC GTTTCGCAGT CGATCCAGCG CCTGAAGGCC CTGGACGAGA CGCTGGGCTC GGGCGCCGAA GGGCTGACCA AGAAAGAGCG CCTGCAAATG GAACGCGAGC AGGCCAAGCT GCAAGCCTCG CTGGGCGGCA TCCGCGAAAT GGGCGGCCTG CCCGACCTGC TGTTCGTCAT CGACGTGAAC AAGGAAGACC TGGCCATCGC CGAGGCGAAG AAGCTGGGCA TCCCGGTCGT CGCCGTGGTC GATACCAACT GCTCGCCCAA GGGCGTTGAC TATGTCATCC CAGGCAACGA CGACGCCGCC CGCGCCATCG CGCTTTACTG CGACCTCGTC AGCCGCGCCG CGCTGGACGG CATGACCGCC CAGATGGGCG CCGCCGGCGT GGACCTTGGC GCGCTGGAAG CCAGCGTCGA GGAAGAGCTG ACCGGCGAGA CCGCTGAAGA AGCCGCCGAA GCCTGA
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Protein sequence | MDMALPEFSM RQLLEAGVHY GHQTQRWNPR MAEFIYGERN GIHIVDLTQT VPMLDAALQV VRDTVAKGGR VLFVGTKRQA QKAVADAAER SAQFYMNHRW LGGTLTNWKT VSQSIQRLKA LDETLGSGAE GLTKKERLQM EREQAKLQAS LGGIREMGGL PDLLFVIDVN KEDLAIAEAK KLGIPVVAVV DTNCSPKGVD YVIPGNDDAA RAIALYCDLV SRAALDGMTA QMGAAGVDLG ALEASVEEEL TGETAEEAAE A
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