Gene Pden_3725 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3725 
Symboltsf 
ID4582277 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp873445 
End bp874335 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content66% 
IMG OID639771035 
Productelongation factor Ts 
Protein accessionYP_917488 
Protein GI119386433 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0264] Translation elongation factor Ts 
TIGRFAM ID[TIGR00116] translation elongation factor Ts 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.689523 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.208993 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTATCA CCGCTGCTAT GGTGAAAGAC CTGCGCGAAA CCACCGGCGC GGGCATGATG 
GACGCCAAGA AGGCGCTGAC CGAAACCAAT GGCGACATGG AAGCCGCCAT CGACTGGCTG
CGCACCAAGG GTCTGGCCAA GGCCGCCAAG AAATCGGGCC GCGTCGCCGC CGAGGGCCTG
GTGGGCGTCG CCGTCCGCGC CGGCCGCGGG GTCGCCGTCG AACTGAACTC GGAAACCGAC
TTCGTCGCCA AGAACGCCGA TTTCCAGCAA CTCGTCCGCG ATATCACCAA TGTCGCGCTG
GATGCCGCCA CCGATGTCGA GGTGCTGAAG GCCACCCACC TGAACGGCCG CCCGGTCGAT
GATGTGCTGA CCGACGCCAT CGCCCGCATC GGCGAGAACA TGACGCTGCG CCGGCTGCAC
GCGCTGGAAG GCGACACCAT CGTCTCCTAC GTGCATAACG CCGCCGCCGA GGGCATGGGC
AAGATCGGCG TGCTGGTCGC GCTGAAGGGC GATGCCGCCA AGGCGCAGGA AATCGGCAAG
CAGATCGCCA TGCATATCGC CGCGACCAAC CCGGCCTCGC TGTCGGAAGC CGATCTGGAC
CCGGCCCTGG TCGAGCGCGA GAAATCGGTG CTGAGCGAGC AGGCCCGCGA ATCGGGCAAG
CCCGAGGCGG TGATCGAGAA GATGATCGAG GGCCGGATGA AGAAGTTCTT CGAGGAGGTG
ACCCTGCTCG GCCAGAAATT CGTCATCAAT CCCGACGTGA CCGTCGCCCA GGCCGCGCAA
GAGGCCGGCG TCGAGGTGAC CGGCTATGCC CGCGTCGTGG TCGGCGAAGG CATCGAGAAG
AAGGAAGAGG ATTTCGCCGC CGAGGTCGCC AAGACCCGCG CCGGCGCCTG A
 
Protein sequence
MAITAAMVKD LRETTGAGMM DAKKALTETN GDMEAAIDWL RTKGLAKAAK KSGRVAAEGL 
VGVAVRAGRG VAVELNSETD FVAKNADFQQ LVRDITNVAL DAATDVEVLK ATHLNGRPVD
DVLTDAIARI GENMTLRRLH ALEGDTIVSY VHNAAAEGMG KIGVLVALKG DAAKAQEIGK
QIAMHIAATN PASLSEADLD PALVEREKSV LSEQARESGK PEAVIEKMIE GRMKKFFEEV
TLLGQKFVIN PDVTVAQAAQ EAGVEVTGYA RVVVGEGIEK KEEDFAAEVA KTRAGA