| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_3706 |
|---|
| Symbol | |
|---|
| ID | 4582258 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008687 |
|---|
| Strand | - |
|---|
| Start bp | 855711 |
|---|
| End bp | 856532 |
|---|
| Gene Length | 822 bp |
|---|
| Protein Length | 273 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639771016 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_917469 |
|---|
| Protein GI | 119386414 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG4598] ABC-type histidine transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.809272 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCAGA CAGAACCGAC CATCTCCGCC AACCCTGCGG CCCCCGATCC GACCGGCGTG
CCGGTGATAG AAATTCGGGA TCTGCACAAG GCCTATGGCC CGCTTCAGGT CATCCGGGGC
GTCAGCCTGA CCGCGCCGCG CGGCCATGTC ATCAGCCTGA TCGGCTCGTC CGGGTCGGGC
AAGTCCACGC TGCTGCGCTG CTGCAACCTG CTCGAGGACA GCCAGCAGGG CGAGATCCTG
TTCGAGGGCG AGGCGGTGAA ATGGCGCGGC ACCGGGCTGG CCCGCGTGCC CGCCGACCGG
GCCCAGGTGA CGCGGCTGCG CACGAACCTC TCGATGGTGT TCCAGCAGTT CAACCTGTGG
TCGCACATGA CCATCCTGCA AAACGTCATG GAAGCGCCGG TCCATGTCCT GAAGCGCAAC
CCGGCACAGG TCGAGGCGCG GGCGCGCGAA TTGCTGGCCA AGGTCGGCAT CGGCGACAAG
GCCGACGCCT GGCCCGCGCA GTTGTCGGGC GGCCAGCAGC AGCGCGCCGC CATCGCCCGC
GCGCTTTGCA TGGAGCCGCG CGCACTGCTT CTGGACGAGC CGACCAGCGC GCTGGACCCC
GAATTGCAGC AAGAGGTGGT GCGCGTCATC AAGGACCTGG CCGCCGAGCA TCGCACCATG
CTGCTGGTCA CCCATGACAT GCGGCTGGCG GCCGATGTCA GCGACCACGT CGTCTTCCTG
CATCAGGGCC GGATCGAGGA AGAGGGACCG CCGGCGCAGC TTTTCGGTGC GCCGCGATCC
GAACGGCTGC GCCAGTTCCT GAGCGCAACC ATGGCAGAAT GA
|
|---|
| Protein sequence | MSQTEPTISA NPAAPDPTGV PVIEIRDLHK AYGPLQVIRG VSLTAPRGHV ISLIGSSGSG
KSTLLRCCNL LEDSQQGEIL FEGEAVKWRG TGLARVPADR AQVTRLRTNL SMVFQQFNLW
SHMTILQNVM EAPVHVLKRN PAQVEARARE LLAKVGIGDK ADAWPAQLSG GQQQRAAIAR
ALCMEPRALL LDEPTSALDP ELQQEVVRVI KDLAAEHRTM LLVTHDMRLA ADVSDHVVFL
HQGRIEEEGP PAQLFGAPRS ERLRQFLSAT MAE
|
|---|
| |