Gene Pden_3688 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3688 
Symbol 
ID4582240 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp836649 
End bp838181 
Gene Length1533 bp 
Protein Length510 aa 
Translation table11 
GC content65% 
IMG OID639770998 
Productcarboxyl transferase 
Protein accessionYP_917451 
Protein GI119386396 
COG category[I] Lipid transport and metabolism 
COG ID[COG4799] Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.618461 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGACA TCCTCGGCGA ACTGGAATCG CGCCGCCGCG ATGCGCGGCT GGGCGGCGGA 
CAGCGACGCA TCGACGCCCA GCACGCCCGC GGCAAGCTGA CCGCGCGCGA GCGGCTCGAG
CTGTTGCTGG ACGAGGGTTC CTTCGAGGAA TTCGACATGT TCGTCCGCCA CCGCTCGACC
GATTTCGGCA TGCAGGAGGA CCGCCCCTAC GGCGACGGCG TGGTCACCGG CTGGGGCACG
ATCAACGGCC GCATGGTCTA TGTGTTCAGC CAGGACTTCA CCGTCTTCGG CGGCTCGCTG
TCGGAAACCC ATGCGCAGAA GATCTGCAAG ATCATGGACA TGGCGGTCCA GAATGGCGCC
CCGGTGATCG GGCTGAACGA TTCGGGCGGC GCGCGCATCC AGGAGGGCGT CGCCAGCCTT
GCCGGCTATG CCGACGTGTT CCAGCGCAAC ATCATGGCCT CGGGCGTGGT GCCGCAGATC
TCGGTCATCA TGGGCCCCTG CGCCGGCGGC GCGGTCTATT CGCCGGCGAT GACCGACTTC
ATCTTCATGG TCAAGGACAC CTCCTACATG TTCGTGACCG GCCCGGACGT GGTCAAGACG
GTGACGAACG AAGTGGTGAC GGCCGAGCAA CTGGGCGGCG CCTCGACCCA TACCAAGAAA
AGCTCGGTCG CCGACGGCGC CTTCGAAAAC GACGTCGAGG CCATGTCCGA GATCCGCCGG
CTGGTCGACC TCTTGCCGCT CAACAACCGC GAGAAGGCGC CGACCCGGCC GTTCTTCGAC
GATCCGAACC GCGTCGAGCC CAGCCTCGAC ACGCTGATCC CCGACAACCC GAACCAGCCC
TACGACATGA AGGAACTGAT CCTGAAGGTC GGGGACGAGG GCGATTTCTA CGAGATCCAG
AAGGATTTCG CCGCCAATAT CATCACCGGC TTCATCCGCA TCGAGGGCCA GACCGTGGGC
GTCGTCGCCA ACCAGCCCAT GGTGCTGGCC GGCTGCCTCG ACATCGACAG CTCGCGCAAG
GCCGCGCGTT TCGTGCGCTT CTGCGACGCC TTCGAGATCC CGATCCTGAC CTTCGTCGAC
GTGCCGGGCT TCCTGCCGGG CACCGGGCAG GAATATGGCG GCGTCATCAA GCATGGCGCG
AAGCTGCTCT TCGCCTATGG CGAGGCGACG GTGCCGAAGG TGACCGTCAT CACCCGCAAG
GCTTACGGCG GCGCCTATGA CGTCATGGCC TCCAAGCACC TGCGCGGCGA TTTCAACTAT
GCCTGGCCCA CCGCCGAGAT CGCCGTGATG GGCGCCAAGG GCGCGGTCGA GATCCTGTAT
CGCAGCGAAC TCGGCGATGC CGAGAAGATC GCCGGCCGCA CCAAGGATTA CGAGGACCGC
TTTGCCAACC CCTTCGTCGC CGCCGAGAAA GGCTTCATCG ACGAGGTGAT CCAGCCGCAT
TCGACCCGCC GCCGCGTCGC AAGGGCCTTT GCCTCACTGC GCGGCAAGAA GCTGTCGAAC
CCCTGGAAGA AGCACGACAA CATCCCGCTG TAA
 
Protein sequence
MKDILGELES RRRDARLGGG QRRIDAQHAR GKLTARERLE LLLDEGSFEE FDMFVRHRST 
DFGMQEDRPY GDGVVTGWGT INGRMVYVFS QDFTVFGGSL SETHAQKICK IMDMAVQNGA
PVIGLNDSGG ARIQEGVASL AGYADVFQRN IMASGVVPQI SVIMGPCAGG AVYSPAMTDF
IFMVKDTSYM FVTGPDVVKT VTNEVVTAEQ LGGASTHTKK SSVADGAFEN DVEAMSEIRR
LVDLLPLNNR EKAPTRPFFD DPNRVEPSLD TLIPDNPNQP YDMKELILKV GDEGDFYEIQ
KDFAANIITG FIRIEGQTVG VVANQPMVLA GCLDIDSSRK AARFVRFCDA FEIPILTFVD
VPGFLPGTGQ EYGGVIKHGA KLLFAYGEAT VPKVTVITRK AYGGAYDVMA SKHLRGDFNY
AWPTAEIAVM GAKGAVEILY RSELGDAEKI AGRTKDYEDR FANPFVAAEK GFIDEVIQPH
STRRRVARAF ASLRGKKLSN PWKKHDNIPL