Gene Pden_3673 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3673 
Symbol 
ID4582225 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp822864 
End bp823505 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content67% 
IMG OID639770983 
ProductTenA family transcription regulator 
Protein accessionYP_917436 
Protein GI119386381 
COG category[K] Transcription 
COG ID[COG0819] Putative transcription activator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.174709 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAAA CCTTCTTCGA GACCCTGCGC GGCGAATGCG CGACCGATTG GTCCGCCGCC 
GTGAACCATC GCTTCGTGCG AGAGCTTTGC GACGGCAGCA TCGCGGATGC GGCGATGGCG
CGCTATCTGG TGCAGGACCA CCGCTTTCTC GATGCCTTCC TGACGCTTTT GGGTGCGGCC
ATCGCCTCGG CCGACCGTTT CGAATCGCGG CTGCGTTTCG GGCGCTTCGC CGGCATGGTC
TCGGGCGAGG AGAACGACTA TTTCCTGCGC GCCTTTGCCG CGCTTGGCGT CAGCGCGGCG
GATCGCGCCG CCATTCCCGA CAGCGCCCCT ACCGCGGGCT TTCAGGCGCT GATGCGCGAG
GCGGCGGCGA CGCGCGCCTA TCCGGCCGTT CTGGCGGTGC TGAACGTGGC CGAGGGGCTT
TACCTCGACT GGGCCATGCG CGCGTCCCGG CCGCTGCCGG AGAACTTCGT CCATGCCGAA
TGGATCACGC TGCACGACAA TCCCTTCTTC CGCGATTTCG TGGGCTTCCT GCGGGACGAG
TTCGACCGCG TCGGGCCCGA GGCGGCGGAT CAGGCGCGGG ACTTCTTCAG CCGTGCCGTC
CGGCTTGAGC GGGAATTTTT CGATGATGCC TACGCGGGCT AG
 
Protein sequence
MTETFFETLR GECATDWSAA VNHRFVRELC DGSIADAAMA RYLVQDHRFL DAFLTLLGAA 
IASADRFESR LRFGRFAGMV SGEENDYFLR AFAALGVSAA DRAAIPDSAP TAGFQALMRE
AAATRAYPAV LAVLNVAEGL YLDWAMRASR PLPENFVHAE WITLHDNPFF RDFVGFLRDE
FDRVGPEAAD QARDFFSRAV RLEREFFDDA YAG