| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_3670 |
|---|
| Symbol | |
|---|
| ID | 4582222 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008687 |
|---|
| Strand | + |
|---|
| Start bp | 818872 |
|---|
| End bp | 820071 |
|---|
| Gene Length | 1200 bp |
|---|
| Protein Length | 399 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 639770980 |
|---|
| Product | HflK protein |
|---|
| Protein accession | YP_917433 |
|---|
| Protein GI | 119386378 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
|---|
| TIGRFAM ID | [TIGR01933] HflK protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.119308 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGGAC AAGGCCCCTG GGGCGGCGGC GGAGATGATG ACAAGGGCGG CAGGCAGCCA
CCGCAGGGCG GCGGCCAGCG CCCCTGGGGC AGCCCGGGGG GCGGCAAGGA CGACAAGCCG
CAGGGGCCGC GCCGCGGCGA CCAGATCCCC GAGATCGAGG AACTGGTGCG CAAGGGCCAG
GACCGGCTGC GCGTGCTGAT GGGCGGCAAG GGGCCGGGCG GCGGCAACCG CGGCGGCGGC
CCGCGCCGGC CGCAGGGTCC GCAATTCCAG ATGAGCCGCG GCACCTGGGG CATCGCCATC
CTCGCCGTGG TGGCGGTCTG GGCCTTTTCC AGCTTCTATA CCGTCAAGCC CGAGGAACGC
GCGGTCGAGC TTTTGTTCGG CAAGCCCGTG GGCACGGGCG AGCCGGGCCT GAACTTCGCG
CCCTGGCCCG TCGTCACCGC CGAGGTGGTG CAGGTCTCGG GCGAGCGGAC AACGGAAATC
GGCACCGGCC GCGCCGGGCC GATGGATTCG GGGCTGATGC TGACCCGCGA CCAGAACATC
GTCGACATGG CTTATCAGGT GGTCTGGAAC ATCTCGGACC CCGAGAAATT CCTGTTCAAC
CTGGCCGATC CCGACGACAC GATCCGCGCC GTCTCGGAAT CCGCCATGCG CGACATCGTG
GCGCGCTCCG AACTGGCGCC GATCCTGAAC CGCGATCGCG GCGCCATCGC CGACGACCTG
AAGCTGGCGG TGCAGAACAC GCTGAACGAT TACGAGGCGG GGATCAACGT GCTGCGCGTC
AACCTCGACC GCGCCGACCC GCCGCGTGAG GTGATCGACA GCTTCCGCGA GGTGCAGGCC
GCCCAGCAGG AACGCGACCG GCTGGAGAAA GAGGCCGACG CCTATGCGAA CCGCGTGCTG
GCCAGCGCCC GGGGCGAGGC CGCCGCCGTG ATCGAACGCG CCGAAGCCTA TCGCGCCGAG
GCCGTGAACA CCGCCGAGGG CGAGGCCGCG CGCTTCAACT CGGTCTATGA CGAATATGTC
AAGGCGCCGG AGGTGACACG CCGCCGGATG TATCTGGAAA CCATGGAAAA GGTTCTGGGC
GGGGTGAACA AGGTCATCCT CGACGGCGAG GCCGGGCAGG GCGTCGTGCC CTATCTGCCG
CTGGATCAGC TGCGCAGCGG GGCTGCGGGC GCTCGCAACA CCGAGGGGGG GAACCAGTGA
|
|---|
| Protein sequence | MAGQGPWGGG GDDDKGGRQP PQGGGQRPWG SPGGGKDDKP QGPRRGDQIP EIEELVRKGQ
DRLRVLMGGK GPGGGNRGGG PRRPQGPQFQ MSRGTWGIAI LAVVAVWAFS SFYTVKPEER
AVELLFGKPV GTGEPGLNFA PWPVVTAEVV QVSGERTTEI GTGRAGPMDS GLMLTRDQNI
VDMAYQVVWN ISDPEKFLFN LADPDDTIRA VSESAMRDIV ARSELAPILN RDRGAIADDL
KLAVQNTLND YEAGINVLRV NLDRADPPRE VIDSFREVQA AQQERDRLEK EADAYANRVL
ASARGEAAAV IERAEAYRAE AVNTAEGEAA RFNSVYDEYV KAPEVTRRRM YLETMEKVLG
GVNKVILDGE AGQGVVPYLP LDQLRSGAAG ARNTEGGNQ
|
|---|
| |