Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_3669 |
Symbol | |
ID | 4582221 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008687 |
Strand | + |
Start bp | 817413 |
End bp | 818813 |
Gene Length | 1401 bp |
Protein Length | 466 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639770979 |
Product | pyridine nucleotide-disulphide oxidoreductase dimerisation region |
Protein accession | YP_917432 |
Protein GI | 119386377 |
COG category | [C] Energy production and conversion |
COG ID | [COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes |
TIGRFAM ID | [TIGR01424] glutathione-disulfide reductase, plant |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.369147 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAATTCG ACTACGACCT TTTCGTCATC GGCGGCGGCT CGGGCGGGGT GCGCGCGGCG CGGATCGCGG CCAGCGAATA CGGCGCCCGC GTCGGCCTGG CCGAGGAAAG CCGGATGGGC GGCACCTGCG TCATCCGCGG CTGCGTGCCC AAGAAGCTGA TGATCTTTGC CTCGCAGGCC GGGGCGGCGG CCGCCGAATC GCGCGGCTAC GGCTGGCAGG GGGCCGGCGA GGGCCGCTTC GACTGGGCCG AGTTCCACGG CAAACTGGGG CGCGAACTCG ACCGGTTGGA GGGTGCCTAT ACCTCGGGTC TGGTCAATGC CGGGGTCGAG GTCCACATGC AGCGCGCCCG GCTGCACGAC GCCCATACGG TCGAGCTGGC GGACGGCCAG CGCCTGACGG CCAAGCATAT CCTGATCGCC ATCGGCGGGC GGCCGCAGCG GCCCGACATT CCGGGCAAGG AACTGGGGCT GATCTCGGAC GACCTGTTCA CGCTGGAGAA ACTGCCCGGT CGGGTGCTGG TGGTGGGCGG CGGCTTCATC GCCTGCGAAT TCGCCACCAT CCTGCAGGGG CTGGGCAGCG CCACGGTGCT GGCCTATCGC GGCGACGCGG TGCTGCGCGG CTTCGACGGC GAGATGCGCC GCCATGTCAC CGAGCAGTTG CGCGCCATCG GCGTCGACGT GCGGCTGGGC ACCAATCCGG CGCGGCTGGA CCGCGAGGGT GCGGGGGTCC GCGTCACCTT CGAGGACGAC AGCAGCGAGA TCTTCGACGC GGTGATGTTC GCCACCGGGC GCGTGCCCTA TACCAAGGGG CTGGGGCTCG AGGATGCCGG CGTCAAGCTG GGCCGCAAGG GCGAGATCGT GGTGGACGAA TGGTCGCAAA GCTCGGTCCC CTCGATCTTT GCCGTGGGCG ACGTGACCGA CCGGGTGAAC CTGACGCCGG TCGCGATCCG CGAGGGGCAC AGCTTCGCCG ACACCGTCTT CGGCGCCCGG CCGCGCAAGG TCGATCATCG GCTGGTGGCC AGCGCCGTCT ATACCCGCCC GCATGAACTG GCCACCATCG GCCTGACCGA GGAAGAGGCC GATGCCTGCG GTCCCGCCGA TGTCTATGTC GCCAGCTTCC GGCCCATGCG CTCGCTTTTC GCCGGCTCGG ATGCGCGGGC GGTGATGAAG CTGATCGTGG ATGCGCAGAC CGACAAGGTG CTGGGTTGCC ACATCTTCGG CCCCGAGGCG GGCGAGATGA TCCAGATGAT CGCCGTGCCC ATGGGCATGG GCGCGACCAA GGCCGATTTC GACGCCGCCA TCGCCGTGCA CCCGACGCTG GCCGAGGAGC TTGTGACCAT GCGCAAGCCT TCGCGCCGGG TGGGGGCGGC AAATCTGGAC AAACCCGTCG CATCGGCTTG A
|
Protein sequence | MKFDYDLFVI GGGSGGVRAA RIAASEYGAR VGLAEESRMG GTCVIRGCVP KKLMIFASQA GAAAAESRGY GWQGAGEGRF DWAEFHGKLG RELDRLEGAY TSGLVNAGVE VHMQRARLHD AHTVELADGQ RLTAKHILIA IGGRPQRPDI PGKELGLISD DLFTLEKLPG RVLVVGGGFI ACEFATILQG LGSATVLAYR GDAVLRGFDG EMRRHVTEQL RAIGVDVRLG TNPARLDREG AGVRVTFEDD SSEIFDAVMF ATGRVPYTKG LGLEDAGVKL GRKGEIVVDE WSQSSVPSIF AVGDVTDRVN LTPVAIREGH SFADTVFGAR PRKVDHRLVA SAVYTRPHEL ATIGLTEEEA DACGPADVYV ASFRPMRSLF AGSDARAVMK LIVDAQTDKV LGCHIFGPEA GEMIQMIAVP MGMGATKADF DAAIAVHPTL AEELVTMRKP SRRVGAANLD KPVASA
|
| |