| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_3667 |
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| Symbol | |
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| ID | 4582219 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008687 |
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| Strand | - |
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| Start bp | 815398 |
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| End bp | 816633 |
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| Gene Length | 1236 bp |
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| Protein Length | 411 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639770977 |
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| Product | 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase |
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| Protein accession | YP_917430 |
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| Protein GI | 119386375 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0245] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
[COG1211] 4-diphosphocytidyl-2-methyl-D-erithritol synthase |
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| TIGRFAM ID | [TIGR00151] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
[TIGR00453] 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCTACT GCCGGCTGCG TCTTTTGGCC GCGACGAAAC GCCTGCCCGG CGGCGATTGC
CTCGGGGCGG CGGCTGACCT AAATCTGGCG GCCATGACGA TACCCGCCAC ATATGCCGCC
ATCATCACCG CCGCCGGCCG CGGCACCCGC GCCGGCGACG GCCCGCCCAA GCAATGGCGC
CCCCTTGCCG GGCAAAGCGT GCTGGAGCGC AGCATCGCCG CCTTTGCCGG CTTTCCCCGC
GTCGTGGTGA CGCTGGCGCC CGAGGACATG GCGCGCGGCG TGGCCGAGCT TTCCGGCCCC
GTGGTGCTGG TCGCGGGCGG CGCCACGCGC AGCGACAGCG TGCGCGCGGC GCTGGAAAGC
CTCGAGGGCA GCGGCGTGAC CCATGTGCTG ATCCATGACG GCGCCCGGCC GCTGGTCTCG
CGCCGCGTGA TCGGGGGCGT CATCGAGGCG CTGCAATCCG GCGCCCCGGC CGCCGCCCCC
GCCCTGCCCG TCACCGACGC GCTGTGGCGG GCCCAGGACG GGTGCGTCAC CGCCACCGCC
AGCCGCGAGG GGCTGTTTCG CGCCCAGACC CCGCAGGGTT TCGCGCTGGA CGCCATCCTT
GCCGCGCATC GCGCCCATCC CGAGGGCGCG GCGGACGACG TGGAACTGGC GATCCGCGCC
GGCCTGCCGG TCACGGTGAC GCCGGGCGAC GAGGACAATC TGAAACTGAC CTGGCCCGGC
GACTTCGCCC GGGCCGAGCG TATCCTGGGG GACGCGATGG ACATCCGGCT TGGCAACGGT
TTCGACGTGC ATGCCTTCAC CACGGGCGAC CATGTCTGGC TTTGCGGGGT GAAGATCCCG
CATGACAAGG CACTCTTGGG CCATTCCGAC GCCGATGTCG GCATGCATGC CCTGACCGAC
GCGATCTACG GCGCGCTGGC GCAGGGCGAT ATCGGCCGGC ACTTCCCGCC CTCGGACCCG
CAATGGAAGG GCGCGGAAAG CCATATCTTC CTGCGCCATG CCGCGATGCT GGCCCGGCAG
ATGGGCTATG AGATCTCGAA TGCCGACGTG ACGCTGATCT GCGAGCGGCC CAAGGTCGGC
CCCCATGCCG GCGCCATGGC GCTGCGGCTG TCCGAGATCA TCGGCGTCGA GCCCGACCGG
GTCAGCGTCA AGGCCACCAC ATCGGAACGG TTGGGCTTTA CCGGGCGCGA GGAAGGCATC
GCCTCCATCG CCACCGCCAC ATTGGTCAAG GGGTAG
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| Protein sequence | MGYCRLRLLA ATKRLPGGDC LGAAADLNLA AMTIPATYAA IITAAGRGTR AGDGPPKQWR
PLAGQSVLER SIAAFAGFPR VVVTLAPEDM ARGVAELSGP VVLVAGGATR SDSVRAALES
LEGSGVTHVL IHDGARPLVS RRVIGGVIEA LQSGAPAAAP ALPVTDALWR AQDGCVTATA
SREGLFRAQT PQGFALDAIL AAHRAHPEGA ADDVELAIRA GLPVTVTPGD EDNLKLTWPG
DFARAERILG DAMDIRLGNG FDVHAFTTGD HVWLCGVKIP HDKALLGHSD ADVGMHALTD
AIYGALAQGD IGRHFPPSDP QWKGAESHIF LRHAAMLARQ MGYEISNADV TLICERPKVG
PHAGAMALRL SEIIGVEPDR VSVKATTSER LGFTGREEGI ASIATATLVK G
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