| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_3662 |
|---|
| Symbol | |
|---|
| ID | 4582214 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008687 |
|---|
| Strand | + |
|---|
| Start bp | 812015 |
|---|
| End bp | 812944 |
|---|
| Gene Length | 930 bp |
|---|
| Protein Length | 309 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639770972 |
|---|
| Product | riboflavin biosynthesis protein RibF |
|---|
| Protein accession | YP_917425 |
|---|
| Protein GI | 119386370 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0196] FAD synthase |
|---|
| TIGRFAM ID | [TIGR00083] riboflavin kinase/FMN adenylyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGCGCATCC ATCACGACTG GAAAGCTCTG CCGCTCGATG CCCGCGGGGC CACCGTCGCC
ATGGGCAATT TCGACGGCAT CCATCTTGGC CATCGTTCGG TGATCGACGC GGCGCGCGCC
GCCTGCGACG CGCCCCTGGG CGTCATCACC TTCGAGCCGC ATCCGCGCGA ATTCTTCGCA
CCCGACGCGC CCCCCTTCCG GCTGATGAAC GTGGAGTCGC GGGCGAACCG GCTGGCCCGG
CTAGGGGTGG ATCATCTTTA CGAACTGCCC TTCGACGCCG TGCTGGCGGG GCTTGCGCCC
GAATCCTTTG CGCGCGAGGT GCTGGTCGAG GGCCTGGGCG TGCGCCATGT CACCGTGGGC
ACCGATTTCT GCTTTGGTCG CAAGCGTTCG GGCGATGCGC AGACGCTGGC CCGGCTGGGG
CGCGAGATGG GCTTCGGCGT CACCGTCGCG CCGCTCATCG GCGACGGCGC GGTGCAATAC
AGCTCGACCG CCATCCGCAA GGCGCTGGCC GAGGGCCGCA CCCGCGATGC CGAGCGGATG
CTGGGCCATT GGCACCGCAT CGACGGCGAG GTGCTGCATG GCGACAAGCG CGGCCGCGAC
CTGGGCTATC CGACCGCGAA CATGGGGGTG GACGGGTTGC ACCTGCCGGC GCTTGGCATC
TATGCCGTGC TGGTCGACGT GCTGACCGGG CCGGACCGCG GCAGCTACAA GGGCGTGGCC
AGCCTTGGCG TGCGCCCGAT GTTCGGCGAG AACCGGCCCA ACCTGGAAGT GCATATCTTC
GATTTCGCGG CCGATCTTTA CGGCCAGCAC CTGTCGGTCG CGCTGGTCGA ATACCTGCGC
CCCGAGGCGA AGTTCGACAG CCTCGAGGCA CTCGTCTCGC AGATGGACCG CGACAGTGCC
CGGGCGCGCG AGATCCTGGC GACCCGCTGA
|
|---|
| Protein sequence | MRIHHDWKAL PLDARGATVA MGNFDGIHLG HRSVIDAARA ACDAPLGVIT FEPHPREFFA
PDAPPFRLMN VESRANRLAR LGVDHLYELP FDAVLAGLAP ESFAREVLVE GLGVRHVTVG
TDFCFGRKRS GDAQTLARLG REMGFGVTVA PLIGDGAVQY SSTAIRKALA EGRTRDAERM
LGHWHRIDGE VLHGDKRGRD LGYPTANMGV DGLHLPALGI YAVLVDVLTG PDRGSYKGVA
SLGVRPMFGE NRPNLEVHIF DFAADLYGQH LSVALVEYLR PEAKFDSLEA LVSQMDRDSA
RAREILATR
|
|---|
| |