Gene Pden_3654 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3654 
SymbolgroEL 
ID4582206 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp804012 
End bp805649 
Gene Length1638 bp 
Protein Length545 aa 
Translation table11 
GC content67% 
IMG OID639770964 
Productchaperonin GroEL 
Protein accessionYP_917417 
Protein GI119386362 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0459] Chaperonin GroEL (HSP60 family) 
TIGRFAM ID[TIGR02348] chaperonin GroL 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGCGA AAGAAGTTAA GTTCAACAGC GACGCGCGTG ACCGGATGCT GAAGGGCGTG 
AACATCCTGG CCGATGCGGT CAAGGTGACG CTTGGCCCGA AGGGGCGCAA CGTGGTGATC
GACAAGTCCT TCGGGGCGCC GCGGATCACC AAGGACGGCG TCTCGGTCGC CAAGGAGATC
GAGCTTTCCG ACAAGTTCGA GAACATGGGC GCGCAGATGG TGCGCGAAGT CGCGTCGCGC
ACCAATGACG AGGCCGGCGA CGGCACCACC ACCGCCACCG TTCTGGCCCA GGCCATCGTG
CGCGAGGGCC TGAAGGCGGT TGCCGCCGGC ATGAACCCGA TGGACCTCAA GCGCGGCATC
GACGTGGCGA CCGCCAAGGT GGTCGAGGCG ATCAAATCCG CCGCCCGCCC GGTGAACGAC
AGCTCGGAAG TGGCGCAGGT CGGCACCATC TCGGCCAACG GCGAGAGCTT CATCGGCCAG
CAGATCGCCG AGGCGATGCA GCGCGTCGGC AACGAGGGCG TGATCACCGT CGAGGAAAAC
AAGGGCATGG AGACCGAGGT CGAGGTCGTC GAAGGCATGC AGTTCGACCG CGGCTACCTC
TCGCCCTATT TCGTGACCAA TGCCGACAAG ATGATCGCCG AGCTGGAGGA TGCCTACATC
CTGCTGCACG AGAAGAAGCT CAGCTCGCTG CAGCCGATGG TGCCGCTGCT GGAATCGGTG
ATCCAGTCGC AGAAGCCGCT GCTGATCGTG GCCGAGGACG TCGAGGGCGA GGCGCTGGCG
ACGCTGGTCG TGAACAAGCT GCGCGGCGGG CTGAAGATCG CCGCCGTCAA GGCTCCGGGC
TTCGGCGACC GCCGCAAGGC CATGCTGCAG GACATCGCCA TCCTGACCGG CGGCCAGGTG
ATCTCGGAAG ACCTGGGCAT GAAGCTTGAG AACGTCACCA TCGACATGCT GGGCCGGGCC
AAGAAGGTCT CGATCAACAA GGACAACACC ACCATCGTCG ACGGCGCCGG CGAGAAGGCC
GAGATCGAGG CGCGGGTGTC GCAGATCCGC CAGCAGATCG AGGAGACCAC CTCGGACTAC
GACCGCGAGA AGCTGCAGGA GCGCGTGGCC AAGCTGGCCG GCGGCGTCGC CGTCATCCGC
GTCGGCGGCA TGACCGAGAT CGAGGTCAAG GAGCGCAAGG ACCGCGTCGA CGACGCGCTG
AACGCGACCC GGGCGGCGGT GCAGGAAGGC ATCGTGGTCG GCGGCGGCGT GGCGCTGGTG
CAGGGTGCCA AGGTGCTCGA GGGCCTGAGC GGCGCGAACT CGGACCAGGA TGCCGGCATC
GCCATCATCC GCCGCGCGCT GGAGGCGCCG ATGCGCCAGA TCGCCGAGAA TGCCGGCGTC
GACGGCGCCG TGGTGGCCGG CAAGGTGCGC GAGTCCTCGG ACAAGGCCTT CGGCTTCAAC
GCCCAGACCG AGGAATATGG CGACATGTTC AAGTTCGGCG TCATCGACCC GGCCAAGGTG
GTGCGCACCG CGCTGGAGGA CGCCGCGTCC GTGGCCGGCC TGCTGATCAC CACCGAGGCG
ATGATCGCCG AAAAGCCCGA GCCCAAGGCC CCCGCAGGCG GCATGCCCGA CATGGGCGGC
ATGGGCGGCA TGATGTAA
 
Protein sequence
MAAKEVKFNS DARDRMLKGV NILADAVKVT LGPKGRNVVI DKSFGAPRIT KDGVSVAKEI 
ELSDKFENMG AQMVREVASR TNDEAGDGTT TATVLAQAIV REGLKAVAAG MNPMDLKRGI
DVATAKVVEA IKSAARPVND SSEVAQVGTI SANGESFIGQ QIAEAMQRVG NEGVITVEEN
KGMETEVEVV EGMQFDRGYL SPYFVTNADK MIAELEDAYI LLHEKKLSSL QPMVPLLESV
IQSQKPLLIV AEDVEGEALA TLVVNKLRGG LKIAAVKAPG FGDRRKAMLQ DIAILTGGQV
ISEDLGMKLE NVTIDMLGRA KKVSINKDNT TIVDGAGEKA EIEARVSQIR QQIEETTSDY
DREKLQERVA KLAGGVAVIR VGGMTEIEVK ERKDRVDDAL NATRAAVQEG IVVGGGVALV
QGAKVLEGLS GANSDQDAGI AIIRRALEAP MRQIAENAGV DGAVVAGKVR ESSDKAFGFN
AQTEEYGDMF KFGVIDPAKV VRTALEDAAS VAGLLITTEA MIAEKPEPKA PAGGMPDMGG
MGGMM