Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_3654 |
Symbol | groEL |
ID | 4582206 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008687 |
Strand | - |
Start bp | 804012 |
End bp | 805649 |
Gene Length | 1638 bp |
Protein Length | 545 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639770964 |
Product | chaperonin GroEL |
Protein accession | YP_917417 |
Protein GI | 119386362 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0459] Chaperonin GroEL (HSP60 family) |
TIGRFAM ID | [TIGR02348] chaperonin GroL |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGCGA AAGAAGTTAA GTTCAACAGC GACGCGCGTG ACCGGATGCT GAAGGGCGTG AACATCCTGG CCGATGCGGT CAAGGTGACG CTTGGCCCGA AGGGGCGCAA CGTGGTGATC GACAAGTCCT TCGGGGCGCC GCGGATCACC AAGGACGGCG TCTCGGTCGC CAAGGAGATC GAGCTTTCCG ACAAGTTCGA GAACATGGGC GCGCAGATGG TGCGCGAAGT CGCGTCGCGC ACCAATGACG AGGCCGGCGA CGGCACCACC ACCGCCACCG TTCTGGCCCA GGCCATCGTG CGCGAGGGCC TGAAGGCGGT TGCCGCCGGC ATGAACCCGA TGGACCTCAA GCGCGGCATC GACGTGGCGA CCGCCAAGGT GGTCGAGGCG ATCAAATCCG CCGCCCGCCC GGTGAACGAC AGCTCGGAAG TGGCGCAGGT CGGCACCATC TCGGCCAACG GCGAGAGCTT CATCGGCCAG CAGATCGCCG AGGCGATGCA GCGCGTCGGC AACGAGGGCG TGATCACCGT CGAGGAAAAC AAGGGCATGG AGACCGAGGT CGAGGTCGTC GAAGGCATGC AGTTCGACCG CGGCTACCTC TCGCCCTATT TCGTGACCAA TGCCGACAAG ATGATCGCCG AGCTGGAGGA TGCCTACATC CTGCTGCACG AGAAGAAGCT CAGCTCGCTG CAGCCGATGG TGCCGCTGCT GGAATCGGTG ATCCAGTCGC AGAAGCCGCT GCTGATCGTG GCCGAGGACG TCGAGGGCGA GGCGCTGGCG ACGCTGGTCG TGAACAAGCT GCGCGGCGGG CTGAAGATCG CCGCCGTCAA GGCTCCGGGC TTCGGCGACC GCCGCAAGGC CATGCTGCAG GACATCGCCA TCCTGACCGG CGGCCAGGTG ATCTCGGAAG ACCTGGGCAT GAAGCTTGAG AACGTCACCA TCGACATGCT GGGCCGGGCC AAGAAGGTCT CGATCAACAA GGACAACACC ACCATCGTCG ACGGCGCCGG CGAGAAGGCC GAGATCGAGG CGCGGGTGTC GCAGATCCGC CAGCAGATCG AGGAGACCAC CTCGGACTAC GACCGCGAGA AGCTGCAGGA GCGCGTGGCC AAGCTGGCCG GCGGCGTCGC CGTCATCCGC GTCGGCGGCA TGACCGAGAT CGAGGTCAAG GAGCGCAAGG ACCGCGTCGA CGACGCGCTG AACGCGACCC GGGCGGCGGT GCAGGAAGGC ATCGTGGTCG GCGGCGGCGT GGCGCTGGTG CAGGGTGCCA AGGTGCTCGA GGGCCTGAGC GGCGCGAACT CGGACCAGGA TGCCGGCATC GCCATCATCC GCCGCGCGCT GGAGGCGCCG ATGCGCCAGA TCGCCGAGAA TGCCGGCGTC GACGGCGCCG TGGTGGCCGG CAAGGTGCGC GAGTCCTCGG ACAAGGCCTT CGGCTTCAAC GCCCAGACCG AGGAATATGG CGACATGTTC AAGTTCGGCG TCATCGACCC GGCCAAGGTG GTGCGCACCG CGCTGGAGGA CGCCGCGTCC GTGGCCGGCC TGCTGATCAC CACCGAGGCG ATGATCGCCG AAAAGCCCGA GCCCAAGGCC CCCGCAGGCG GCATGCCCGA CATGGGCGGC ATGGGCGGCA TGATGTAA
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Protein sequence | MAAKEVKFNS DARDRMLKGV NILADAVKVT LGPKGRNVVI DKSFGAPRIT KDGVSVAKEI ELSDKFENMG AQMVREVASR TNDEAGDGTT TATVLAQAIV REGLKAVAAG MNPMDLKRGI DVATAKVVEA IKSAARPVND SSEVAQVGTI SANGESFIGQ QIAEAMQRVG NEGVITVEEN KGMETEVEVV EGMQFDRGYL SPYFVTNADK MIAELEDAYI LLHEKKLSSL QPMVPLLESV IQSQKPLLIV AEDVEGEALA TLVVNKLRGG LKIAAVKAPG FGDRRKAMLQ DIAILTGGQV ISEDLGMKLE NVTIDMLGRA KKVSINKDNT TIVDGAGEKA EIEARVSQIR QQIEETTSDY DREKLQERVA KLAGGVAVIR VGGMTEIEVK ERKDRVDDAL NATRAAVQEG IVVGGGVALV QGAKVLEGLS GANSDQDAGI AIIRRALEAP MRQIAENAGV DGAVVAGKVR ESSDKAFGFN AQTEEYGDMF KFGVIDPAKV VRTALEDAAS VAGLLITTEA MIAEKPEPKA PAGGMPDMGG MGGMM
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