Gene Pden_3651 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3651 
Symbol 
ID4582203 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp800145 
End bp800831 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content68% 
IMG OID639770961 
Productaquaporin Z 
Protein accessionYP_917414 
Protein GI119386359 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0580] Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) 
TIGRFAM ID[TIGR00861] MIP family channel proteins 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.997199 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAAAGA AACTCCTGGC CGAAGGCATC GGCACGTTCT GGCTCGTGTT CGGCGGCTGC 
GGCAGCGCCG TCCTCGCGGC GGCTTTCCCA GAACTCGGAA TCGGTTTTGC TGGCGTCGCC
CTGGCCTTCG GCCTGACGGT GCTGACCATG GCCTATGCGT TGGGCGGCAT CTCGGGCGGC
CATTTCAACC CGGCGGTCTC GGTGGGCCTG ACGGTCGCGG GGCGCTTTCC GGCGGCAAGC
CTGCTGCCCT ATATCCTCGC CCAGCTTGCC GGCGCCATCA TCGCCGCCGT CATCCTTTAC
CTGATCGCCA GCGGCAAGGC CGGCGTCGAT CTGGGCGGGT TCGCCGCCAA CGGCTATGGC
GAGCATTCGC CGGGCGGCTA TCCGATGTTC TCGGCGCTGC TGATCGAAGT CGTGCTGACG
GCCGGCTTCC TGATCGTGAT CCTGGGCGCC ACCCATGGCC GCGTGCCGGC GGGCTTCGCC
CCGCTTGCCA TCGGCCTGGC GCTGACGCTG ATCCACCTGA TCTCGATCCC GGTGACCAAC
ACTTCGGTCA ACCCGGCCCG CTCGACCAGC CAGGCGCTTT TCGCCGGGGG CTGGGCGCTG
CAACAGCTCT GGCTGTTCTG GGTCGCGCCG ATCGCCGGCG CCGTCCTGGG CGGCCTTCTG
TGGAAGGTGG TGGGCGAGCA CGACTGA
 
Protein sequence
MQKKLLAEGI GTFWLVFGGC GSAVLAAAFP ELGIGFAGVA LAFGLTVLTM AYALGGISGG 
HFNPAVSVGL TVAGRFPAAS LLPYILAQLA GAIIAAVILY LIASGKAGVD LGGFAANGYG
EHSPGGYPMF SALLIEVVLT AGFLIVILGA THGRVPAGFA PLAIGLALTL IHLISIPVTN
TSVNPARSTS QALFAGGWAL QQLWLFWVAP IAGAVLGGLL WKVVGEHD