| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_3629 |
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| Symbol | hemE |
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| ID | 4582181 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008687 |
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| Strand | - |
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| Start bp | 780469 |
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| End bp | 781497 |
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| Gene Length | 1029 bp |
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| Protein Length | 342 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639770939 |
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| Product | uroporphyrinogen decarboxylase |
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| Protein accession | YP_917392 |
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| Protein GI | 119386337 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0407] Uroporphyrinogen-III decarboxylase |
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| TIGRFAM ID | [TIGR01464] uroporphyrinogen decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.204246 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGAAA AAACCATCCT GCGCGCGCTG AAGGGCGAGC GTTTGCCCGT CCCGCCTGTC
TGGATGATGC GCCAGGCCGG CCGCTACCTG CCGGAATACC GCGCCACCCG CGCCCAGGCC
GGCGACTTTT TGTCGCTGTG CTACACGCCG GACCTGGCGG CCGAGGTGAC GCTGCAACCG
ATCCGCCGCT ATGGTTTCGA CGCGGCGATT CTCTTTGCCG ACATCCTGCT GCTGCCGCAG
GCGCTGGGGC TCGACCTGTG GTTCGTGACC GGCGAGGGGC CGCGGCTCTC GACCGTGACC
AGCGCCGCAG GGGTCGCGGC CCTGAAACCC GCCGCCGCGA TCCACGACAC GCTGTCGCCG
GTCTATGAAA CCGTCCGCAT CCTGGCGCGC GAACTGCCGC GCGAGACCAC GCTGATCGGC
TTTGCCGGCG CGCCCTGGAC CGTCGCGACC TACATGGTCG CCGGCCGCGG CACCCCCGAC
CAGGCCCCCG CCCACGCCTT CAAGGCCGAG GACCGCGCCG CCTTCGCCGC CCTGATCGAC
CGGATCACCG AGGCGACCAT CGACTATCTC TCGGCCCAGA TCGAGGCCGG GGCCGAGGTG
GTGAAGCTGT TCGACAGCTG GGCCGGTTCG CTCAAGGGCC GGGACTTCGA CGATTTCGCG
GTCGAGCCCG CGCGCCGGAT CATCGCCGCG CTCAAGGCGC GCCATCCCGG CATCCCGGTG
ATCGCCTTCC CGCGCGAGGC CGGGCCGCGC TATGCCGGCT TCGCCCGCGC GACGGGGGCC
GATTGCGTGG CGCTGGACAA TTCGGTCAGC GCCGACTGGG CGGCCGCCGA GGTGCAAAAG
GACGGCTGCG TGCAGGGCAA TCTCGACCCG CGCCTGCTGG TCAGCGGCGG CGAGGAGCTC
GTCTCCGAAA CGCGCCGGAT CGTGCAGGCC TTCTCGCGGG GTCCGCATAT CTTCAACCTC
GGCCATGGCA TCACCCCCGA GGCCGATCCC GAGAACGTCG CGCGGATGCT GGAGGCGATC
CGGGGCTGA
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| Protein sequence | MSEKTILRAL KGERLPVPPV WMMRQAGRYL PEYRATRAQA GDFLSLCYTP DLAAEVTLQP
IRRYGFDAAI LFADILLLPQ ALGLDLWFVT GEGPRLSTVT SAAGVAALKP AAAIHDTLSP
VYETVRILAR ELPRETTLIG FAGAPWTVAT YMVAGRGTPD QAPAHAFKAE DRAAFAALID
RITEATIDYL SAQIEAGAEV VKLFDSWAGS LKGRDFDDFA VEPARRIIAA LKARHPGIPV
IAFPREAGPR YAGFARATGA DCVALDNSVS ADWAAAEVQK DGCVQGNLDP RLLVSGGEEL
VSETRRIVQA FSRGPHIFNL GHGITPEADP ENVARMLEAI RG
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