Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_3627 |
Symbol | |
ID | 4582179 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008687 |
Strand | + |
Start bp | 778997 |
End bp | 779587 |
Gene Length | 591 bp |
Protein Length | 196 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639770937 |
Product | lysine exporter protein LysE/YggA |
Protein accession | YP_917390 |
Protein GI | 119386335 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1280] Putative threonine efflux protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.0538229 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGCATC AGATACTCGT GGCGCTTGTC GCCTTCGCCT TCGTCACCTC GGTCACGCCG GGGCCCAACA ACCTGATGCT GATGGCCTCG GGTGCGAATT TCGGCATCCG CCGCAGCATT CCGCATCTTC TGGGCGTGGC GCTGGGATTT GGCGCCATGG TGGCGCTGTT GGGGCTGGGC GTGGACCGGC TGATCGCGGG CGCGCCGCGG CTGGCCGAGG CGTTGAAATG GATCAGCATG GCTTACGTCC TGTGGCTTGC GTGGAAGATC GCCTATGCTG CGGCGCCCGG AACCGAAGGG GCGGCGGCGC GGCCGATGAG CTTCCTGGCC GCCTGCGCCT TTCAATGGGT GAATCCCAAG GCGTGGATGA TGGCGCTGGG GGCGCTTTCG GCCTATTCGG CCGGGGTGGG CGGCACGCTG GTGGTGGCGC TGGTCTTTAC CCTGGTGAAC CTGCCCTCGG TCGCGCTTTG GGCGGCGATG GGGCAGGGGT TGCGCGGCGC CTTGCAGGAC CCGGCGCGGC TCATGCTGTT CAACCGGGCG ATGGCGGTGC TGCTGGTCGG CTCGATGCTG CCGGTCGTCA CCGGGCACTG A
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Protein sequence | MSHQILVALV AFAFVTSVTP GPNNLMLMAS GANFGIRRSI PHLLGVALGF GAMVALLGLG VDRLIAGAPR LAEALKWISM AYVLWLAWKI AYAAAPGTEG AAARPMSFLA ACAFQWVNPK AWMMALGALS AYSAGVGGTL VVALVFTLVN LPSVALWAAM GQGLRGALQD PARLMLFNRA MAVLLVGSML PVVTGH
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