Gene Pden_3621 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3621 
Symbol 
ID4582173 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp773869 
End bp774531 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content69% 
IMG OID639770931 
Producthypothetical protein 
Protein accessionYP_917384 
Protein GI119386329 
COG category[R] General function prediction only 
COG ID[COG1853] Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACGCGCC GCGCGCATGG GGTCACTTCT GGGCCCCGCA TCAGGGATGG ATCAGCGAGG 
CACGCCATGT TCTACCGACC CCAGGACGGC CACGGGCTGC CGCATAACCC GCTGAGCGCC
ATCGTCGCGC CGCGCCCCAT CGGCTGGATC TCGACCCGCG GCCGGCAGGG CGACAACCTG
GCGCCCTATT CCTTCTTCAA CCTGACCGCC TATGTGCCGC CGCAGCTGAT GTTCGCATCG
ACCTCGGCCA AGCCGGATCG GCCCGGGACC AAGGACAGCG TGGCCCAGAT CGCGCAATCG
CGGGTGTTCT GCGTCAACAT CGCCGACGGA TCGCTGAAGG ATCAGGTGAA CGCCAGTTCC
GCCGCATTGT CCGCCGGGGT GAACGAATTC GAGGCGGCCG GCATCGAGGC GGCCGAATGC
GAGACCATCG ACTGCCCCCG CGTCGCCGGC GCCGCCGCCG CGCTGGAATG CCGCGCCACG
CGCATCCTGC GGCTGGCGGG CGAGGCGAAC TACATGGTGC TGGGCGTCGT CACCGGCATC
CACCTGCGCG AGGACTGCCT GAAGGACGGC CGCTTCGACC TGCGTGGGAT CGGCTGGCTG
TCGCGGCTGG GCTACAAGGA CTACACCATC ACCACCGAGA CCTTCGAGAT GGAGCGCCCC
TGA
 
Protein sequence
MTRRAHGVTS GPRIRDGSAR HAMFYRPQDG HGLPHNPLSA IVAPRPIGWI STRGRQGDNL 
APYSFFNLTA YVPPQLMFAS TSAKPDRPGT KDSVAQIAQS RVFCVNIADG SLKDQVNASS
AALSAGVNEF EAAGIEAAEC ETIDCPRVAG AAAALECRAT RILRLAGEAN YMVLGVVTGI
HLREDCLKDG RFDLRGIGWL SRLGYKDYTI TTETFEMERP