Gene Pden_3602 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3602 
Symbol 
ID4582154 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp751752 
End bp753809 
Gene Length2058 bp 
Protein Length685 aa 
Translation table11 
GC content61% 
IMG OID639770912 
Producthypothetical protein 
Protein accessionYP_917365 
Protein GI119386310 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGAGA GTTTTGAAGA AAAGGTCAAC CGGGTTCTGC GCGACCATGA GGGTTTCACC 
GGGGACGGGC GCGGCGGCGT TGGCGATCTG CCCGTTGGTG ACAGGTCCAC CGCCAGAAAG
CCCATCGACA AGCGCGGCCT GCGGGAACTG TTCCTTGCTC CGGTTGGATA TGCCGCGCTG
GCAGAGGCGG CGGCGGATCG TGCCGCGCTG TATGATGGAT TCTGGATAGA CAGCATCCCA
GACCTGCGCG TAGATACCAG CTTGTCCTAT AGCGGCGACG GCGCGGTCTC TGTTGGCGGA
TTTGTCGTTA CCCGAGATAT GGGCGCTGTG TTCCGCGTTC TGTCGTCCTC CGCAACGAGG
CCGCATCTCG TTACGGCCGG CGGTGTCAAG CTGGAAGTGG CATACTGGCC GCGCGATGAT
CGGGGCGCGC TTGCAGAGAT TGGCGTGCGG GCGCAGAACG GGCAGGCGGT TTATCTAGCC
GGCTATGGGG ATAGCACGGT CGTAGGAACG GACAGCACTG AGACCTACAA CAACTGGCCG
AACCGTCTGG GCAGCATCCT TCGGGCAATG ACTGGAAACG AGAGCGTCAC CGTTTATAAC
TGCGGCGACA ACGGCAAGCG GGTATCGGAC TGGTGGGCGT GGGACAATCT TGCGGCAAAG
ATTACCACCC CGTATCCGAA TACGCAGTAT GTGCTGACCT GCTGGGGCAC CAACGATATC
AAATATGACG GGCTGCCCGA CTGGAACCCG GCGCTGTTCA AGTCGCGCTA TGCCGCCCAT
ATCAACCAGA TCCGCCTTGC TGGCATGGTT CCTATCATGG TCACGCCGTG GCCGGTTTCG
GCGGCTCCGA TGCGTCCTCT GGCGACCTAT CAGGGCGAAT TGCTTAATGC GGTTCGCGAA
CTGGCCGACG AACTGATGGT CGATTTGATT GACACGAACG CCATGCTGAA AAACTGGCAG
CGTGACCGCA CCGACCAATA CCGGGTCGGT GACCAGCAAT CGGACGGCGT GCATTATACC
GATGTGCCGC ACATCCTCAT CGCCGGATAT ATGGCTCGGC TGATTTACCA GCATCGGGTG
ATCGACGTGC GGCACGGTTC GCGCCTCGGG CCGCAGGATG CAAAATTCTC GGCTGATGTG
ACGGTTGCCT ACAACCGCAA TATGAGCAAC GCTTGGGGGT TCTCGGCGCA ACTTACCGCT
GCGGCTGCGG TTCCGATGGC CGCCGAAATC TGGGTCTGGT CGGATCGCGC CCGGAAGGCC
GTCTATGTCA GCCCGGACAG ATCGGTTGTC TCGGGCGGAA ACCCGGCATT CGCCTATGTC
GGCCTTGCAG GAACCGGGAC CGATGCGGGG GTTGAAATTG GATTCGGCAA TGCGGGGGTC
ACGACCACCG AACGGCCGGC CGAGAACCAT ATCTATGTGA ATGAACTGCC GTTCGGCTTG
TCACGGCTGC GCTTCCGGGC CTCCGGGGCC GGAACGGTCG AATTTGGCGG ATGGCTGATC
GTGGATCAGT TCGACCCGGT TTCTGTTTCC GCTTATTCCA TTGCATCGGA ACGTCAACTG
TTCCTGCCCG AGTTTGCGGA TAGTCGCCCC GAGGTGGTTC CGAAGGCCGG CGCGATTACC
AATCTTGCCT TGATCGGCAA CATTCCTGTC GGGTGGGGTG TCGTGATCGG AACCCAATAC
GTCTACGCCA ATGATTCGAA CACCGGGCCG TCGCGCCGCA AAATGAGCAT CGTCGCTCTG
CGCGCGTCCT CAGGGGCCGA TATTCTGCGG GTGCTAAGTG GCGCGTCCGC AGGTGTGTTC
GCCGCTACCT CGATCAAAAC CAGTGGTTCC GGGTCGTGGG CGGGGCAGAT CACGATCCAT
TGCACCACTG ACGGCAGCGG CAATGCCGAT ATTCAAGTGC GGGCGGACGG AGCGATCATC
GCCCGCCACA CCAATGGCGG CACCGATCCG TTCATGTCAC CATATGGCCG CATGGGCGGC
CTCTACCGGG ATAATACTCT GGTCAGCGAT CCGGGCGGAC GACAGGCCGT CGCCACGCTG
ATCCCGATGC CGACCTAA
 
Protein sequence
MPESFEEKVN RVLRDHEGFT GDGRGGVGDL PVGDRSTARK PIDKRGLREL FLAPVGYAAL 
AEAAADRAAL YDGFWIDSIP DLRVDTSLSY SGDGAVSVGG FVVTRDMGAV FRVLSSSATR
PHLVTAGGVK LEVAYWPRDD RGALAEIGVR AQNGQAVYLA GYGDSTVVGT DSTETYNNWP
NRLGSILRAM TGNESVTVYN CGDNGKRVSD WWAWDNLAAK ITTPYPNTQY VLTCWGTNDI
KYDGLPDWNP ALFKSRYAAH INQIRLAGMV PIMVTPWPVS AAPMRPLATY QGELLNAVRE
LADELMVDLI DTNAMLKNWQ RDRTDQYRVG DQQSDGVHYT DVPHILIAGY MARLIYQHRV
IDVRHGSRLG PQDAKFSADV TVAYNRNMSN AWGFSAQLTA AAAVPMAAEI WVWSDRARKA
VYVSPDRSVV SGGNPAFAYV GLAGTGTDAG VEIGFGNAGV TTTERPAENH IYVNELPFGL
SRLRFRASGA GTVEFGGWLI VDQFDPVSVS AYSIASERQL FLPEFADSRP EVVPKAGAIT
NLALIGNIPV GWGVVIGTQY VYANDSNTGP SRRKMSIVAL RASSGADILR VLSGASAGVF
AATSIKTSGS GSWAGQITIH CTTDGSGNAD IQVRADGAII ARHTNGGTDP FMSPYGRMGG
LYRDNTLVSD PGGRQAVATL IPMPT