Gene Pden_3588 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3588 
Symbol 
ID4582141 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp740435 
End bp741883 
Gene Length1449 bp 
Protein Length482 aa 
Translation table11 
GC content67% 
IMG OID639770899 
Productamidohydrolase 
Protein accessionYP_917352 
Protein GI119386297 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1228] Imidazolonepropionase and related amidohydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGCCAGA GCTGTCTTGA GGCCATATCC GACACCGGCA GGTTGCATTT TTGTCATTGC 
GGCAGCCCCG AGACACTGGC CGCCATGCGC AAAATCGAAG CGGACATCTC GCGGCGGCAA
ATGCTGGGCG GAATGGCGGC GGTGGTCGGC ATGTTCGCTG GCTTCGGCCT TGCTCCCACC
GAGGTGCGGG CGCAGGCCTC CGGCATCCCC GTCCTGCTGA CCAACCTGCG CCTCTTCGAC
GGCACCACCT TGACGCTGCG CGACGGCGTC GAAATCCTGA TCGAGGGCGG GCGCATCTCG
GCACTGCCCG CCCCGGGACA GGGGCCGGCC GAGGCCGAAC GGATCGATTG CGGCGGGCGC
ACCGTCATTC CCGGCCTGAT CGACACCCAT TGGCATACGA CGCTGGCCTC GGTCAGCCAG
ATCGTCGCGA TGACGCAGGA TATCGGCTTC CTGCACCTGA TGGCGGGGAA AGAGGCCGGT
GCCACGCTCC AGCGCGGGTT TACCACGGTG CGCGACGTCG GCGGCCCGGC CTTCGGCCTG
CAGGCCGCAG TGGATCGCGG CGTGGTCGCG GGACCGCGCA TCTTCCCGGC CGGTGCGATC
ATCAGCCAGA CCTCGGGCCA TGGCGACTTC CGCTTCCAGA ACAGCCTGCC GATGATGCCC
GCCGACCCGG CGGATTACGC CAGCGCCGCC GGCATGTCGG CGCTGGCCGA TGGCGTGCCC
GAGGTGCTGC GCCGCACGCG CGAACAGCTG ATGAAGGGCG CGAGCCAGAT CAAGATCACC
GCCGGCGGCG GCGTCGCATC GCAATACGAC CCGCTGGAAT CGCTGCAATT CACCGAGGCC
GAGATGCGCG CGGCGGTGGA TGCCGCCAGC GACTGGGGCA CCTATGTCTG CGCCCATGTC
TATACTTCGG CGGGGATCCA GCGCTGCATC AAGGCAGGGG TCAAATCCAT CGAGCACGGG
CAACTCGCGG ATGAGGACAC CGTGCGGATG ATGGCCGATA ACGGCACCTG GTGGTCCATC
CAGCCCTTCC TCGCCGATGA GGACGCCAAC AAATACACCG ATCCCAAGGC CGTCGCGGCA
CAGAAGATGG TGGCCGAGGG GACGATGCGC GCCTTCGAAT GGGCCGACAA GCATCGGGTG
AACTGGGCCT TCGGCACCGA CATCCTTTAT GGCGGCGGCG AAAGCCAGGG ACGGCAACTG
ACCAAGCTGG CGCGCTTCAT GTCGCCGCTG GCGGCGCTGC ATCGCGCCAC CGGGGCGGCG
GGCGAGCTTC TGACCCTTTC CGGCGGCCGG GCGCCCTATG ACGGCAGGCT TGGGGTAATC
GCCGAGGGCG CGCTTGCCGA TCTGCTGGTC ATCGATGGCG ATGCCGAGGC CGGGCTGGAC
TGGCTGGCCG ATACCGACAA TCTGCGACTG ATCATGAAGG GCGGTCGCAT GTTCAAGAAC
AGCCTGTGA
 
Protein sequence
MCQSCLEAIS DTGRLHFCHC GSPETLAAMR KIEADISRRQ MLGGMAAVVG MFAGFGLAPT 
EVRAQASGIP VLLTNLRLFD GTTLTLRDGV EILIEGGRIS ALPAPGQGPA EAERIDCGGR
TVIPGLIDTH WHTTLASVSQ IVAMTQDIGF LHLMAGKEAG ATLQRGFTTV RDVGGPAFGL
QAAVDRGVVA GPRIFPAGAI ISQTSGHGDF RFQNSLPMMP ADPADYASAA GMSALADGVP
EVLRRTREQL MKGASQIKIT AGGGVASQYD PLESLQFTEA EMRAAVDAAS DWGTYVCAHV
YTSAGIQRCI KAGVKSIEHG QLADEDTVRM MADNGTWWSI QPFLADEDAN KYTDPKAVAA
QKMVAEGTMR AFEWADKHRV NWAFGTDILY GGGESQGRQL TKLARFMSPL AALHRATGAA
GELLTLSGGR APYDGRLGVI AEGALADLLV IDGDAEAGLD WLADTDNLRL IMKGGRMFKN
SL