Gene Pden_3579 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3579 
Symbol 
ID4582132 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp731289 
End bp732599 
Gene Length1311 bp 
Protein Length436 aa 
Translation table11 
GC content66% 
IMG OID639770890 
Producthistidinol dehydrogenase 
Protein accessionYP_917343 
Protein GI119386288 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0141] Histidinol dehydrogenase 
TIGRFAM ID[TIGR00069] histidinol dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCATCA CCTATCTGAA ATCCGGCCGC AGCGACTCGG CCCGTGCCGA GGACGACCGC 
CGCACCCGCG AGACGGTCGA GGCCGCGCTG GCCGACATTT CCGCGCGCGG CGACATTGCC
GTGCGCGAAA TGGCGGCGAA ATTCGACGGC TACGCCCCGG ACAGCTTCCG CCTGTCGCAG
GATCAGATCG ACGCGCTGAT CGCGACGCTG ACCCCGCGCG AGATCGAGGA TATCCGCTTT
GCGCAGGCGC AGGTGCGCCG CTTTGCCCAG ATCCAGCGCG ATTCCATGAA GGATGTCGAG
GTCGAGACCC TGCCGGGCGT GGTCCTTGGC CACAAGCACA TCCCCGTTCA GGCGGTGGGC
TGCTATGTGC CGGGCGGCAA GTTCCCGATG GTGGCCTCGG CGCATATGTC GATCCTGACC
GCCTCGGTCG CGGGCGTGCC GCGCATCATC GCCGCGACCC CGCCCTTTCA GGGCAAGCCC
AATGCCGCCG TGATCGCCGC CATGCATTTC GCCGGCGCGC ATGAGATCTA TGTCCTCGGC
GGTATCCAGG CCATCGGTGC GATGGCGCTT GGCACCGAAA CCATCGCCCC CGTCGATATG
CTGGTCGGCC CCGGCAACGC CTTCGTGGCC GAGGCCAAGC GGCAACTGTT CGGGCGCGTC
GGCATCGATC TTTTCGCCGG TCCGACCGAG ACGATGGTGA TCGCCGACGA CACCGTGGAC
GCCGAGCTTT GCGCGACCGA TCTGCTGGGC CAGGCCGAAC ACGGCTATAA CTCGCCCGCC
GTGCTGGTGA CGAATTCGCG TGCGCTGGCC GAAGGCACGT TGGCCGAGAT CGAACGGCTG
CTGGCGATCT TGCCGACCGC CGTCACCGCC GCCGCGTCGT GGCGCGACTA CGGCGAGGTG
ATCCTGTGCG ACACGCATGA AGAGATGTTG CAGGTCGCCA ACGAGATCGC ATCGGAACAT
GTGCAGGTGA TGACCGACCG CGACGACTGG TATCTGGACA GCATGGTCGA TTACGGCGCG
CTGTTCCTTG GCCCGCGCAC CCATGTCGCC AACGGCGACA AGGTGATCGG CACCAATCAC
ACTTTGCCGA CGCGCCGCGC CGGACGTTAT ACCGGCGGGC TCTGGGTCGG GAAATTCATC
AAGACCCACA CCTATCAGCG CGTCCTGACG GATGACGCCG CCGCCGATAT CGGCCGCTAT
TGCTCGCGCC TGTGCATGAT CGAGGGCTTT GTCGGCCATG CCGAACAGGC CAATATCCGC
GTGCGCCGCT ATGGTGGCGA CAACATTCCC TATGGCGAGG CCGCCCAATG A
 
Protein sequence
MAITYLKSGR SDSARAEDDR RTRETVEAAL ADISARGDIA VREMAAKFDG YAPDSFRLSQ 
DQIDALIATL TPREIEDIRF AQAQVRRFAQ IQRDSMKDVE VETLPGVVLG HKHIPVQAVG
CYVPGGKFPM VASAHMSILT ASVAGVPRII AATPPFQGKP NAAVIAAMHF AGAHEIYVLG
GIQAIGAMAL GTETIAPVDM LVGPGNAFVA EAKRQLFGRV GIDLFAGPTE TMVIADDTVD
AELCATDLLG QAEHGYNSPA VLVTNSRALA EGTLAEIERL LAILPTAVTA AASWRDYGEV
ILCDTHEEML QVANEIASEH VQVMTDRDDW YLDSMVDYGA LFLGPRTHVA NGDKVIGTNH
TLPTRRAGRY TGGLWVGKFI KTHTYQRVLT DDAAADIGRY CSRLCMIEGF VGHAEQANIR
VRRYGGDNIP YGEAAQ