Gene Pden_3577 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3577 
Symbol 
ID4582130 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp729392 
End bp730327 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content71% 
IMG OID639770888 
Product3-hydroxyacyl-CoA dehydrogenase, NAD-binding 
Protein accessionYP_917341 
Protein GI119386286 
COG category[I] Lipid transport and metabolism 
COG ID[COG1250] 3-hydroxyacyl-CoA dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTCATA TCGCCATTGT CGGAGCGGGG CTGATCGGCC GCGCATGGGC CTTTGTCTTT 
GCGCGCGCCG GGTTCGACGT GCGGGTCTGG GACCTCGACC CGCAGGTGCT GGAACGGCTG
GACGGCGACA TCGCCGCGAT GGTCGCGCAG ACCGCGCCCT TCGGGCAGGC GGGCGCGGAT
CCCGACGCCA CCGCCGCGCG CATCCGCGCC GTGCCGGACC TGGCCGGGGC GCTGGACGGC
GCCGAGCTGG TGCAGGAAAG CGGCCCCGAG GTGCTGGCGA TCAAGCGCGA GCTTTTCGCC
CGGTTGGACG GGCTGGCGGC GGCGGGGGTG ATCCTTGCCT CCAGCTCATC GGCGCTGATG
GCCTCGGCCT TCGCCGAGGG CCTGCCGGGG GCGTCGCGCT GCCTTGTCGG CCATCCGGTC
AACCCCCCGC ATCTGGTGCC GGTGGTCGAG ATCGCCCCCG CGCCCTTTAC CGATCCGGTG
ATCACCGCCC GCGCCCGCGA CATCTATGCC CGCGCCGGTC AGGTGCCGGT CATGCTGAAG
CGCGAGATCG ACGGCTTTAT CCTCAACCGC CTGCAAGCGG TGGTCCTGGC CGAAAGCCTG
CGCCTGATCG AGCAGGGCTA TGTCGATCCG CAGGGGCTTG ACGACACCAT CCGGCATGGG
CTTGGCCGCC GCTGGGCCTT CATGGGCCCG ATGGAGACGA TCAACCTCAA CGCGCCCGGC
GGTGCGGGGG ATTACCTCGC CCGCTATGGC CGGATGATGG CCGGTCTGGC GAAGACCTCG
GCGCGCGACG AGGCCTTTAC GGCGCAGGCC GCCGCCATCG TCGGCTCGGC CTTTCCCGAT
ACCGCGACCC CGCAGGCCAT CCGCGCCCGG CAGGACTGGC GCGACGGGCG CCTTGCCGCG
CTGGCCCGCC ATCTGGCCGA CCAGCCGCAA CATTAG
 
Protein sequence
MSHIAIVGAG LIGRAWAFVF ARAGFDVRVW DLDPQVLERL DGDIAAMVAQ TAPFGQAGAD 
PDATAARIRA VPDLAGALDG AELVQESGPE VLAIKRELFA RLDGLAAAGV ILASSSSALM
ASAFAEGLPG ASRCLVGHPV NPPHLVPVVE IAPAPFTDPV ITARARDIYA RAGQVPVMLK
REIDGFILNR LQAVVLAESL RLIEQGYVDP QGLDDTIRHG LGRRWAFMGP METINLNAPG
GAGDYLARYG RMMAGLAKTS ARDEAFTAQA AAIVGSAFPD TATPQAIRAR QDWRDGRLAA
LARHLADQPQ H