| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_3576 |
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| Symbol | |
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| ID | 4582129 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008687 |
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| Strand | + |
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| Start bp | 726867 |
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| End bp | 729383 |
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| Gene Length | 2517 bp |
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| Protein Length | 838 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639770887 |
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| Product | ABC transporter related |
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| Protein accession | YP_917340 |
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| Protein GI | 119386285 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism |
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| COG ID | [COG1129] ABC-type sugar transport system, ATPase component
[COG4177] ABC-type branched-chain amino acid transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATACCC AAAAACGTGC GGCGATGAGG AATCTGCTGA TCGTGGCGGC AGGGCTGGTG
CTGCTGCCGG TCTTGCTGGG CCGGATCGGG CTGGGCGCGA ATTCCGCCGT CGAGGTGGTG
ATCTATGCCC TGGCCGCGAT GGGGCTGAAC GTGCTGGTGG GTTATACCGG CCTCGTCTCG
TTCGGGCATG GCGTCTGGTT CGGGACGGCG GCCTATATTG TTGGGCTGAC CGCGCGGTCG
ATGGGCAATG CCAGCATGGC CGTGTCGCTG ACCGTCGGAG TGGTCGCCAC CGCGCTGATC
GCGGCGCTTG TCGGCTTTCT GGTGCTGCGG CGGCGCGGGG TCTATTTCTC GCTGATGACG
CTGGCGCTGT CGGCGATGGG CTTCCAGCTT GCCTTCCGCT GGACCGACGT GACCGGCGGC
GAGAACGGCC TTGGCGGGAT CGAGCGTCCC GCGATGCTGG ACGCCAATCT CAGCTTCTAC
ATCTTCGTGG CGCTGCTGGG CTTTGCCGTG ATCGCGCTGC TTCAGCGGGT GCTGCAATCG
CCCTTCGGCT CGGTCCTCGA AGCCATCCGC GAGAACGACG GCCGCGCGCA GGCGCTTGGC
TATGACGTGC GCCGCTACAA GCTGAAAGCC TTTGTCCTAT CGGCCGCGAT CACCGGGCTT
GCGGGGGGAC TGCTGCTTTA CAAGAACCGC ATGACCTCGG CCGAGCCGAT GTCGATCATC
TTCTCGGGCG AGTTGCTGGC GATGGTCGTC ATCGGCGGGA TGCGCGGCTA TCTGGGACCG
GCGCTGGGGG CGCTGTTCTA CATCCTCTTC CGCGAATACC TGTCGATGTA TAGCGAGAAC
TGGCTGCTCT GGTTCGGGCT GATCTTCGTC GGCTTCGTGA TCTTTGCGCG CCAAGGCATG
ATCGGCATCG GGACGCAGCT TCGCCGCCGC TTCTTTCCCG AGCCCGAGAC CGGCGCCGCC
ATGGCGGAAC GCAGGACCGG CGACTATCCC TTGCCCCGCG CGATCGCGGA ACGCGACGGC
GGTGGCGGCG ACGTGCTGGT GGCGGAAGGG ATCTCGAAGC ATTTCAATGC GATCAAGGCG
GTGGACGATG TCTCGCTGCG GGTCAGGGAT CGCACGCTTC ACGCGCTTCT GGGGCCCAAC
GGGGCGGGCA AGACCACGGC CTTCAACCTG ATGTCGGGGA TCATCCCGAC CAGCGCGGGC
GGCGTCTCGT TCATGGGGCA GGATATTTCC GGCAAGTCGG CCGACCATAT CTCGAATCTG
GGGCTGGGGC GGTCGTTCCA GATCACCAAT CTTTTCCCCG AGCTGACCGT GCGCGAGAAT
ATCCGCCTTG CCGTCCAGGC CCGCGATCCC AGCCGCAGTG ACATGTTGTG TTCGACCGCC
AGCATCGCCC AGGTCCATGA AAAGGTCGAG GAGATGATCA ACTGGGTCGG CCTTGCCGGG
ATGGAGAACG CCCGCGCGGG CTCGCTGTCC TATGGCGGGC AGCGGCTTCT GGACCTCGGC
CTGGCGCTGG CGACCGAGCC GCGCATCCTG CTGGCGGACG AACCCCTTGC CGGCCTGTCG
GTCGCGGAAC GCGAGCGGGT CGGGTTGCTG ATCAAGGACG TCTCGAAAAG CCTGCCGGTG
TTGCTGGTCG AGCATGACAT CGACCGCGTG TTCGAGCTTG CCGACCATGT CACCGTCATG
GCGGACGGCA AGGTGCTGGT CGACGGCACG GTGGACGACG CCCGCAACTC GCGCGAGGTG
TGCGACATCT ATATCGGTTC GGGCACCAGC GAGGTCGCGG CCTCGGCGCG GCAGGGGCAG
TTCTCGGCGG AAAAGATCCT GCAACTGGAC AAGGTGAACC TGCATTACGG CAAGAGCCAC
ATCCTGCAGG ACGTCAGCTT CGACCTGCAC AAGGGCGAGA TCCTGGCGCT GCTGGGTCGC
AACGGCGCGG GCAAATCCTC GGTGCTGAAG GCGGTGACGG GGATCGTGCC GCCGTCCTCG
GGTTCGGTCC GGCTGATGGA GCATGAGCTT GCCGGCCTGT CCAGCGCCCG GATCGCGCGG
TTGGGCATCG GCTATGTGCC GCAAGGCCGG GGGCTTTTCG CCGGAATGAC CGTGCGCGAG
AACCTGGAGC TGGGCCGCAT CCGCCGCCAG ACGGGCGAGG GCACGCATTG GTCGCTGGAA
GAGATCCTCG AATACTTCCC CCGGCTGCGC GAGCGACTGG ATACGCCTGC CGACAGCATG
TCGGGGGGTG AGCAGCAGAT GGCCGCGGTC GCCCGCGCGC TGTCGGGCGA TATCCGTGTC
CTGCTGCTGG ACGAGCCCTT CGAGGGGCTG GCCCCGGCGG TGGTCGAGCA GCTGTTCCGC
ACCTTCGACA AGCTGCGCGA CCGGCTGTCG ATCGTGATCG TGGACCACAA CCTCGACCTG
GCGCTGGCGC TTTCGGACCG CACCATCGTG CTGGAGCGCG GTCGCGTGCT GCATGAAATC
GAATCCCGCC GCATCGCCGA AGATATCGAG CTGCGGCGCG AAATGCTGTG GATGTAG
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| Protein sequence | MNTQKRAAMR NLLIVAAGLV LLPVLLGRIG LGANSAVEVV IYALAAMGLN VLVGYTGLVS
FGHGVWFGTA AYIVGLTARS MGNASMAVSL TVGVVATALI AALVGFLVLR RRGVYFSLMT
LALSAMGFQL AFRWTDVTGG ENGLGGIERP AMLDANLSFY IFVALLGFAV IALLQRVLQS
PFGSVLEAIR ENDGRAQALG YDVRRYKLKA FVLSAAITGL AGGLLLYKNR MTSAEPMSII
FSGELLAMVV IGGMRGYLGP ALGALFYILF REYLSMYSEN WLLWFGLIFV GFVIFARQGM
IGIGTQLRRR FFPEPETGAA MAERRTGDYP LPRAIAERDG GGGDVLVAEG ISKHFNAIKA
VDDVSLRVRD RTLHALLGPN GAGKTTAFNL MSGIIPTSAG GVSFMGQDIS GKSADHISNL
GLGRSFQITN LFPELTVREN IRLAVQARDP SRSDMLCSTA SIAQVHEKVE EMINWVGLAG
MENARAGSLS YGGQRLLDLG LALATEPRIL LADEPLAGLS VAERERVGLL IKDVSKSLPV
LLVEHDIDRV FELADHVTVM ADGKVLVDGT VDDARNSREV CDIYIGSGTS EVAASARQGQ
FSAEKILQLD KVNLHYGKSH ILQDVSFDLH KGEILALLGR NGAGKSSVLK AVTGIVPPSS
GSVRLMEHEL AGLSSARIAR LGIGYVPQGR GLFAGMTVRE NLELGRIRRQ TGEGTHWSLE
EILEYFPRLR ERLDTPADSM SGGEQQMAAV ARALSGDIRV LLLDEPFEGL APAVVEQLFR
TFDKLRDRLS IVIVDHNLDL ALALSDRTIV LERGRVLHEI ESRRIAEDIE LRREMLWM
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