Gene Pden_3573 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3573 
Symbol 
ID4582126 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp723857 
End bp724570 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content66% 
IMG OID639770884 
ProductGntR family transcriptional regulator 
Protein accessionYP_917337 
Protein GI119386282 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCCCTT TGTCAATGAC CGAGCTGAGC AACCCGCGCC CACCCATGAA AACGGCGTCC 
CTGACCGGAC AGGTCTATGA CGCGATTGCG GAGATGCTGC TGGATGGGAC CCTCAAGCCC
GACAGCCGCA CCTCGATCCG CGAACTGAGC GAATATCTGG GCGTCTCGGC CATGCCGGTG
CGCGAAGCCA TCGGCCGGCT GGTCGCCCAG GGCGCGCTGG CGATCCAGCG CAACAAGGCG
GTGGTCGTGC CCCCGATGAC GCCCGAGGAT CTGCGCGATC TGGTCCGCAC GCGCGTGCTG
CTGGAATGCG AGGCGGCGCG GCTGGCGGTC GACCGCATCC CGGATTCGGC CATCCTCCGC
ATCCGCGAAT TGCACGAACA GTTCAGCCGC GAACTCAGCG CCAACAACCG GGCCGCAGCC
CTGACGCTGA ACCGCCGGCT GCATTTCACC CTTTACGATG CCGCCGAATC GCCCAGCCTG
CGCAACCTGA TCGCCATGTC GTGGCTGCGC GCGGGCCCGA TGATCTCGCT GGATCTTGGG
CCGCACAACG CCATCGAGCG TGCCAGCCAT TCGGTCGATG CCCACGCCCA TCTGGTCGCA
GCGCTGCAAT CGCGCGACCG CGAGGCCGCC GCCAAGGCGA TCGAACTGGA TATCACCACG
GCGGCCGGCA TCATCCTGGA ACACCTGGCA CATGCAAGAG AAAGCCGAAC ATGA
 
Protein sequence
MGPLSMTELS NPRPPMKTAS LTGQVYDAIA EMLLDGTLKP DSRTSIRELS EYLGVSAMPV 
REAIGRLVAQ GALAIQRNKA VVVPPMTPED LRDLVRTRVL LECEAARLAV DRIPDSAILR
IRELHEQFSR ELSANNRAAA LTLNRRLHFT LYDAAESPSL RNLIAMSWLR AGPMISLDLG
PHNAIERASH SVDAHAHLVA ALQSRDREAA AKAIELDITT AAGIILEHLA HARESRT