Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_3573 |
Symbol | |
ID | 4582126 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008687 |
Strand | - |
Start bp | 723857 |
End bp | 724570 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639770884 |
Product | GntR family transcriptional regulator |
Protein accession | YP_917337 |
Protein GI | 119386282 |
COG category | [K] Transcription |
COG ID | [COG1802] Transcriptional regulators |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGGCCCTT TGTCAATGAC CGAGCTGAGC AACCCGCGCC CACCCATGAA AACGGCGTCC CTGACCGGAC AGGTCTATGA CGCGATTGCG GAGATGCTGC TGGATGGGAC CCTCAAGCCC GACAGCCGCA CCTCGATCCG CGAACTGAGC GAATATCTGG GCGTCTCGGC CATGCCGGTG CGCGAAGCCA TCGGCCGGCT GGTCGCCCAG GGCGCGCTGG CGATCCAGCG CAACAAGGCG GTGGTCGTGC CCCCGATGAC GCCCGAGGAT CTGCGCGATC TGGTCCGCAC GCGCGTGCTG CTGGAATGCG AGGCGGCGCG GCTGGCGGTC GACCGCATCC CGGATTCGGC CATCCTCCGC ATCCGCGAAT TGCACGAACA GTTCAGCCGC GAACTCAGCG CCAACAACCG GGCCGCAGCC CTGACGCTGA ACCGCCGGCT GCATTTCACC CTTTACGATG CCGCCGAATC GCCCAGCCTG CGCAACCTGA TCGCCATGTC GTGGCTGCGC GCGGGCCCGA TGATCTCGCT GGATCTTGGG CCGCACAACG CCATCGAGCG TGCCAGCCAT TCGGTCGATG CCCACGCCCA TCTGGTCGCA GCGCTGCAAT CGCGCGACCG CGAGGCCGCC GCCAAGGCGA TCGAACTGGA TATCACCACG GCGGCCGGCA TCATCCTGGA ACACCTGGCA CATGCAAGAG AAAGCCGAAC ATGA
|
Protein sequence | MGPLSMTELS NPRPPMKTAS LTGQVYDAIA EMLLDGTLKP DSRTSIRELS EYLGVSAMPV REAIGRLVAQ GALAIQRNKA VVVPPMTPED LRDLVRTRVL LECEAARLAV DRIPDSAILR IRELHEQFSR ELSANNRAAA LTLNRRLHFT LYDAAESPSL RNLIAMSWLR AGPMISLDLG PHNAIERASH SVDAHAHLVA ALQSRDREAA AKAIELDITT AAGIILEHLA HARESRT
|
| |