Gene Pden_3569 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3569 
Symbol 
ID4582122 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp720832 
End bp722058 
Gene Length1227 bp 
Protein Length408 aa 
Translation table11 
GC content65% 
IMG OID639770880 
Productformamidase 
Protein accessionYP_917333 
Protein GI119386278 
COG category[C] Energy production and conversion 
COG ID[COG2421] Predicted acetamidase/formamidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.704003 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGAAAA CCGTATTCAA GGTCGATCTC AACACGGCCC CCGAGGACGC CGCGCAAAAG 
CCGCACAACC GCTGGCATCC CGACATCCCG ATGGTCGAGA CCTTCAAGCC CGGCGAGGTG
CTGCGCATCG AATGCTACGA CTGGACCGGC GGCCAGATCG GCAACAACGA CAGTGCCAAC
GATATCCGCG ACGTCGACCT GACGCGGGTG CATTACCTGT CCGGTCCCTT CGGCTTCGAG
GGGGCCGAGC CGGGCGACCT GCTGGTGGTG GACATCCTCG ATATCGGTGC GCTCGAGGAT
TCGCGCTGGG GCTTCAACGG GCTTTTCGCC AAGGAGAACG GCGGCGGCTT CCTGACCGAG
CATTACCCGC AGGCCACCAA GTCGATCTGG GATTTCGAGG GCATCTACAC CACCTCGCGC
CATATCCCCG GCGTGCGCTA TCCCGGCCTG ATCCATCCCG GCCTGATCGG CTGCCTGCCC
GACCACAAGC TGCTGGCCGA GGCGAACCGG CGCGAGGCGG CGCTGATCGC CACCGACCCG
AACCGCGTCC CGCCGCTGGC GGCGCCGCCC CATGCCGCGA CCGCGCTGAT GGGGCAGATG
AAGGGCGCCG CCGCGCAAAG CGCCGCCGAT GAGGCCTGGC GCACGGTGCC GCCGCGCGAG
CATGGCGGCA ACTGCGACAT CAAGAACCTG TCGCGCGGCT CCAAGGTCTA TTTCCCGGTC
TATGTGAAGG GCGGCGGCCT TTCGATGGGC GACATTCATT TCAGCCAGGG CGACGGCGAG
ATCACCTTTT GCGGCGCCAT CGAGATGGCC GGCTGGATCG AGATCAAGGT CGAGATCATC
AAGGGCGGCA TGGCGAAATA CGGCGTCATC AACCCGATCT TCCGGCCTTC GCCCATCGAC
CCGCATTTCG ACGACTACCT GATCTTCGAG GGCATCTCGG TCGACGAGCA CACGGGCGAG
CAATATTACC TGGACGCCCA TGTCGCCTAT CGCCGGGCCT GCCTCAACGC CATCGAATAC
CTGAAGAAGT TCGGCTATTC GGGCGAGCAG GCCTATATGA TCCTCGGCAC CGCCCCGGTC
GAGGGCCGCA TCGCCGGCAT CGTGGACATC CCCAATGTCT GCGCGACGCT GGCGATCCCG
ACCGGCATCT TCGACTTCGA CATCCGGCCC AACGGCGACG GGCCGAAACG CTCGGTCCCC
GAGGTTTCGG TCGCCAGAAC CAGCTGA
 
Protein sequence
MSKTVFKVDL NTAPEDAAQK PHNRWHPDIP MVETFKPGEV LRIECYDWTG GQIGNNDSAN 
DIRDVDLTRV HYLSGPFGFE GAEPGDLLVV DILDIGALED SRWGFNGLFA KENGGGFLTE
HYPQATKSIW DFEGIYTTSR HIPGVRYPGL IHPGLIGCLP DHKLLAEANR REAALIATDP
NRVPPLAAPP HAATALMGQM KGAAAQSAAD EAWRTVPPRE HGGNCDIKNL SRGSKVYFPV
YVKGGGLSMG DIHFSQGDGE ITFCGAIEMA GWIEIKVEII KGGMAKYGVI NPIFRPSPID
PHFDDYLIFE GISVDEHTGE QYYLDAHVAY RRACLNAIEY LKKFGYSGEQ AYMILGTAPV
EGRIAGIVDI PNVCATLAIP TGIFDFDIRP NGDGPKRSVP EVSVARTS