| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_3557 |
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| Symbol | |
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| ID | 4582112 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008687 |
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| Strand | - |
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| Start bp | 708579 |
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| End bp | 709733 |
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| Gene Length | 1155 bp |
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| Protein Length | 384 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639770870 |
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| Product | DegT/DnrJ/EryC1/StrS aminotransferase |
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| Protein accession | YP_917323 |
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| Protein GI | 119386268 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis |
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| TIGRFAM ID | [TIGR03588] UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.4551 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCCTT ATGGCCGCCA GGACATCGAC GACGCCGATA TCACGGCGGT GGTCGAAGTC
CTGAAAAGTG ATTTCATCAC CCAGGGCCCG GCGGTGCCGC GTTTCGAGGC AGCGCTGAGC
GACTGGTGCG GCGTGCCGCA TGCGGTGGCG ATGAACAGCG CCACCTCGGC GCTGCATGTC
GCCTATCTGG CGCTCGGCCT CGGACCCGGC GACGAGTTCT GGACGGCGCC GGTCACCTTC
GTCGCCACTG CCAATGCCGC GCTTTATTGC GGGGCGGAGG TGCGCTTCGT CGACATCGAC
CCGGTGACCT ACACGCTCGA TCTCGACCGG CTGGAGGCGA TGCTGGTCGT GGCGGAGGCC
GAGGGACGGC TGCCGAAGAT CGTGGCGCCG GTGCATCTGG CGGGACAGTC CTGCGACATG
GCGCGGCTGG CGGAGCTTGC CCGCCGCTAC GGCTTCCGCG TGGTCGAGGA TGCCAGCCAT
TCGATCGGCG CCTTCTTCGG CAATGCTCCG GTCGGCGACT GCCGCTTTTC CGACATCTGC
GTCTTTTCCT TCCATCCGGT GAAGATCATC ACCACCGCCG AGGGCGGGGC CGCGACCACC
CGCGATCCCG AACTGGCGCA GAAGATAGAA CTGCTGCGCA GCCATGGCGT GACGCGCGAC
CCTGCCCTGA TGCGCAACGA GCCGCATGGC GGCTGGTATT ACGAGCAGGT GGCGCTTGGC
TACAACTACC GGATGACCGA CCTGCAGGCT GCGCTCGGCG CCAGCCAGAT GGCCCGGCTT
GCGGGCTTCA TCGAGGCCCG CCACGCCCGC CGCGCGGTCT ATGACGAGCA GCTGCGTGGC
CTGCCGCTGC AACTGCCGCA TCAGGCGGAG GGCCAGCGCT CGGCGCTGCA TCTCTATCCC
GTGCTGGTGA CGCAGGACGC ACCGCTCGAC CGCCGCGCGT TGTTCGACGC GCTGCGCGCA
GCCGGGATCG GGGTGAACAT GCACTACCTG CCGGTCTACC GTCAGCCCTG GTACGTCGAG
CACGGCTTCC CGCAGGACGA GTGCCCGGTG GCCGAGGACT ACTATGCCCG CGCGCTCTCG
ATCCCGCTCT ATGCCACGCT GAGCGAGGCC GACCAGGCGC AGGTCATCGC CACGCTGCAC
CGGCTGCTCT GTTGA
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| Protein sequence | MIPYGRQDID DADITAVVEV LKSDFITQGP AVPRFEAALS DWCGVPHAVA MNSATSALHV
AYLALGLGPG DEFWTAPVTF VATANAALYC GAEVRFVDID PVTYTLDLDR LEAMLVVAEA
EGRLPKIVAP VHLAGQSCDM ARLAELARRY GFRVVEDASH SIGAFFGNAP VGDCRFSDIC
VFSFHPVKII TTAEGGAATT RDPELAQKIE LLRSHGVTRD PALMRNEPHG GWYYEQVALG
YNYRMTDLQA ALGASQMARL AGFIEARHAR RAVYDEQLRG LPLQLPHQAE GQRSALHLYP
VLVTQDAPLD RRALFDALRA AGIGVNMHYL PVYRQPWYVE HGFPQDECPV AEDYYARALS
IPLYATLSEA DQAQVIATLH RLLC
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